RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 PLSCR3Q9NRY6 295 aa17.36■□□□□ 0.37
C9orf3-222ENST00000496567 CHST1O43916 411 aa17.35■□□□□ 0.37
C9orf3-222ENST00000496567 NDUFA3O95167 84 aa17.35■□□□□ 0.37
C9orf3-222ENST00000496567 VSIG10L2P0DP72 767 aa17.35■□□□□ 0.37
C9orf3-222ENST00000496567 UCP1P25874 307 aa17.35■□□□□ 0.37
C9orf3-222ENST00000496567 CNTFRP26992 372 aa17.35■□□□□ 0.37
C9orf3-222ENST00000496567 SP6Q3SY56 376 aa17.35■□□□□ 0.37
C9orf3-222ENST00000496567 S1PR2O95136 353 aa17.34■□□□□ 0.37
C9orf3-222ENST00000496567 OR4E1P0C645 316 aa17.34■□□□□ 0.37
C9orf3-222ENST00000496567 NQO2P16083 231 aa17.34■□□□□ 0.37
C9orf3-222ENST00000496567 ANXA7P20073 488 aaKnown RBP17.34■□□□□ 0.37
C9orf3-222ENST00000496567 VAMP1P23763 118 aa17.34■□□□□ 0.37
C9orf3-222ENST00000496567 SUPT4H1P63272 117 aaKnown RBP17.34■□□□□ 0.37
C9orf3-222ENST00000496567 PSG5Q15238 335 aa17.34■□□□□ 0.37
C9orf3-222ENST00000496567 VMA21Q3ZAQ7 101 aa17.34■□□□□ 0.37
C9orf3-222ENST00000496567 GLYATL2Q8WU03 294 aa17.34■□□□□ 0.37
C9orf3-222ENST00000496567 hCG_2014768A0A024R1R8 64 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 FAM181BA6NEQ2 426 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 SRRM4A7MD48 611 aaKnown RBP17.33■□□□□ 0.37
C9orf3-222ENST00000496567 RRHO14718 337 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 IGLV2-23P01705 113 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 CRYBA1P05813 215 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 MECP2P51608 486 aaKnown RBP17.33■□□□□ 0.37
C9orf3-222ENST00000496567 PPP1R1AQ13522 171 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 C4orf46Q504U0 113 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 FAM71E2Q8N5Q1 922 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 C5orf56Q8N8D9 126 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 Q8N9W7 124 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 RHOVQ96L33 236 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 RASL11BQ9BPW5 248 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 NPFFR1Q9GZQ6 430 aa17.33■□□□□ 0.37
C9orf3-222ENST00000496567 SLC25A17O43808 307 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 ATG12O94817 140 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 SFT2D2O95562 160 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 RAG2P55895 527 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 UBE2KP61086 200 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 ERVK-16P61578 105 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 SRPXP78539 464 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 TMEM187Q14656 261 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 PLGLAQ15195 96 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 TEX45Q8NA69 505 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 VSTM2AQ8TAG5 236 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 R3HDM4Q96D70 268 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 METTL1Q9UBP6 276 aaKnown RBP17.32■□□□□ 0.36
C9orf3-222ENST00000496567 PIGBOS1A0A0B4J2F0 54 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 CDS2O95674 445 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 HLA-AP01891 365 aaKnown RBP17.32■□□□□ 0.36
C9orf3-222ENST00000496567 POU2AF1Q16633 256 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 C5orf64Q2M2E5 130 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 DMBX1Q8NFW5 382 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 MARVELD1Q9BSK0 173 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 FBXL15Q9H469 300 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 BEX1Q9HBH7 125 aa17.32■□□□□ 0.36
C9orf3-222ENST00000496567 MARCH11A6NNE9 402 aa17.31■□□□□ 0.36
C9orf3-222ENST00000496567 RAB25P57735 213 aa17.31■□□□□ 0.36
C9orf3-222ENST00000496567 LYG2Q86SG7 212 aa17.31■□□□□ 0.36
C9orf3-222ENST00000496567 ZNF695Q8IW36 515 aa17.31■□□□□ 0.36
C9orf3-222ENST00000496567 TMEM56Q96MV1 263 aa17.31■□□□□ 0.36
C9orf3-222ENST00000496567 TMEM56-RWDD3S4R434 201 aa17.31■□□□□ 0.36
C9orf3-222ENST00000496567 C9orf170A2RU37 121 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 INMT-MINDY4F8WBC2 141 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 KRASP01116 189 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 IGKV1-39P01597 117 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 IGKV1D-39P04432 117 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 SAA1P0DJI8 122 aaPredicted RBP17.3■□□□□ 0.36
C9orf3-222ENST00000496567 DHRS2Q13268 280 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 SSX9Q7RTT3 188 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 VKORC1L1Q8N0U8 176 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 LGI3Q8N145 548 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 RBPMSQ93062 196 aaKnown RBP17.3■□□□□ 0.36
C9orf3-222ENST00000496567 IL22RA2Q969J5 263 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 SIGLEC9Q9Y336 463 aa17.3■□□□□ 0.36
C9orf3-222ENST00000496567 OR2A4O95047 310 aa17.29■□□□□ 0.36
C9orf3-222ENST00000496567 AMY1AP04745 511 aa17.29■□□□□ 0.36
C9orf3-222ENST00000496567 LIN54Q6MZP7 749 aa17.29■□□□□ 0.36
C9orf3-222ENST00000496567 PPP1R27Q86WC6 154 aa17.29■□□□□ 0.36
C9orf3-222ENST00000496567 CADM3Q8N126 398 aa17.29■□□□□ 0.36
C9orf3-222ENST00000496567 CASTOR1Q8WTX7 329 aa17.29■□□□□ 0.36
C9orf3-222ENST00000496567 OR2A7Q96R45 310 aa17.29■□□□□ 0.36
C9orf3-222ENST00000496567 PRSS22Q9GZN4 317 aa17.29■□□□□ 0.36
C9orf3-222ENST00000496567 RANBP3Q9H6Z4 567 aaPredicted RBP17.29■□□□□ 0.36
C9orf3-222ENST00000496567 SETD2Q9BYW2 2564 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-222ENST00000496567 CREBL2O60519 120 aaPredicted RBP17.28■□□□□ 0.36
C9orf3-222ENST00000496567 DHFRP00374 187 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 IL5P05113 134 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 CRYGBP07316 175 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 G6PCP35575 357 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 TMEM268Q5VZI3 342 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 OR4A47Q6IF82 309 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 PUSL1Q8N0Z8 303 aaKnown RBP17.28■□□□□ 0.36
C9orf3-222ENST00000496567 OR4A5Q8NH83 315 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 SEC22AQ96IW7 307 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 BET1LQ9NYM9 111 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 PRAF2O60831 178 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 KBTBD11O94819 623 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 DUS4LO95620 317 aaKnown RBP17.28■□□□□ 0.36
C9orf3-222ENST00000496567 HLA-DRB1P01911 266 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 AKR1C2P52895 323 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 BLCAPP62952 87 aa17.28■□□□□ 0.36
C9orf3-222ENST00000496567 PRIMA1Q86XR5 153 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms