RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 GUCA1BQ9UMX6 200 aa2.92□□□□□ -1.94
CCDC39-207ENST00000495817 PRR14LQ5THK1 2151 aa2.92□□□□□ -1.94
CCDC39-207ENST00000495817 YLPM1P49750 1951 aaKnown RBP2.92□□□□□ -1.94
CCDC39-207ENST00000495817 SIPA1L3O60292 1781 aaPredicted RBP2.92□□□□□ -1.94
CCDC39-207ENST00000495817 RFX7Q2KHR2 1363 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 IGHV3OR15-7A0A075B7D8 119 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 M0QZ92 97 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 SLC31A1O15431 190 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 TNNC2P02585 160 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 GYPCP04921 128 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 CRABP2P29373 138 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 CCL7P80098 99 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 DHRS2Q13268 280 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 ZNF141Q15928 474 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 DEFB115Q30KQ5 88 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 FAM45BPQ6NSW5 357 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 C3orf33Q6P1S2 294 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 WDR59Q6PJI9 974 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 CYHR1Q6ZMK1 362 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 EIF4E3Q8N5X7 224 aaKnown RBP2.91□□□□□ -1.94
CCDC39-207ENST00000495817 TMEM251Q8N6I4 163 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.91□□□□□ -1.94
CCDC39-207ENST00000495817 OR5B17Q8NGF7 314 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 CMTM2Q8TAZ6 248 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 SPPL2BQ8TCT7 592 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 FAM172AQ8WUF8 416 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 PTH2Q96A98 100 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 TRIB3Q96RU7 358 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 HOPXQ9BPY8 73 aaPredicted RBP2.91□□□□□ -1.94
CCDC39-207ENST00000495817 TSSK6Q9BXA6 273 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 CHST5Q9GZS9 411 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 C6orf62Q9GZU0 229 aaPredicted RBP2.91□□□□□ -1.94
CCDC39-207ENST00000495817 TRABDQ9H4I3 376 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 GINS2Q9Y248 185 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 ERGIC3Q9Y282 383 aa2.91□□□□□ -1.94
CCDC39-207ENST00000495817 NAV1Q8NEY1 1877 aa2.9□□□□□ -1.94
CCDC39-207ENST00000495817 TRBV24-1A0A075B6N3 115 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 GGTLC3B5MD39 225 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 KRTAP5-8O75690 187 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 DHFRP00374 187 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 SERPINA1P01009 418 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 LTAP01374 205 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 ORM1P02763 201 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 GUSBP08236 651 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 P0C880 135 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 NQO1P15559 274 aaKnown RBP2.9□□□□□ -1.95
CCDC39-207ENST00000495817 CTLA4P16410 223 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 ZNF708P17019 499 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 SERPINB1P30740 379 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 CLDN12P56749 244 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 PSME3P61289 254 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 RANP62826 216 aaKnown RBP2.9□□□□□ -1.95
CCDC39-207ENST00000495817 AESQ08117 197 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 MLLT11Q13015 90 aaPredicted RBP2.9□□□□□ -1.95
CCDC39-207ENST00000495817 SPCS2Q15005 226 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 HACD4Q5VWC8 232 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 SYPL2Q5VXT5 272 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 CCDC121Q6ZUS5 278 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 VN1R4Q7Z5H5 301 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 OR5L1Q8NGL2 311 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 OR11L1Q8NGX0 322 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 OR4A5Q8NH83 315 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 OR2V1Q8NHB1 315 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 PYDC1Q8WXC3 89 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 SLC19A3Q9BZV2 496 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 SLC22A4Q9H015 551 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 ALX4Q9H161 411 aaPredicted RBP2.9□□□□□ -1.95
CCDC39-207ENST00000495817 XPNPEP1Q9NQW7 623 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 ZNF391Q9UJN7 358 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 PAIP2BQ9ULR5 123 aaKnown RBP2.9□□□□□ -1.95
CCDC39-207ENST00000495817 RIC1Q4ADV7 1423 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 RANBP2P49792 3224 aaKnown RBP2.9□□□□□ -1.95
CCDC39-207ENST00000495817 LAMA3Q16787 3333 aa2.9□□□□□ -1.95
CCDC39-207ENST00000495817 KDM3BQ7LBC6 1761 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 COL6A3P12111 3177 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.89□□□□□ -1.95
CCDC39-207ENST00000495817 A6NED7 52 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 C2orf74A8MZ97 194 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 FTCDNL1E5RQL4 147 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 F5H768 121 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 CCRL2O00421 344 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 TGOLN2O43493 480 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 SYNGR2O43760 224 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 STX10O60499 249 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 APOEP02649 317 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 OPN1SWP03999 348 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 CTSEP14091 401 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 RAP1GDS1P52306 607 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 TNFRSF9Q07011 255 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 TAF9Q16594 264 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 CLEC12BQ2HXU8 276 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 PYCR3Q53H96 274 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 HENMT1Q5T8I9 393 aaKnown RBP2.89□□□□□ -1.95
CCDC39-207ENST00000495817 KMT2EQ8IZD2 1858 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 RIBC1Q8N443 379 aaPredicted RBP2.89□□□□□ -1.95
CCDC39-207ENST00000495817 OR52E4Q8NGH9 312 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 OR9I1Q8NGQ6 314 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 OR5K1Q8NHB7 308 aa2.89□□□□□ -1.95
CCDC39-207ENST00000495817 GALMQ96C23 342 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms