RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 OR2J3O76001 311 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 NDUFB8O95169 186 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 HLA-AP01891 365 aaKnown RBP13.13□□□□□ -0.31
TMEM53-209ENST00000495630 CDK1P06493 297 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 EDN2P20800 178 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 RAB11BQ15907 218 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 C2orf76Q3KRA6 126 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 FAM106AQ4KMX7 169 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 TMEM61Q8N0U2 210 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 OR52B4Q8NGK2 314 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 FBLIM1Q8WUP2 373 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 GFI1Q99684 422 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 ZNF257Q9Y2Q1 563 aa13.13□□□□□ -0.31
TMEM53-209ENST00000495630 ERICH4A6NGS2 130 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 LINC00473A8K010 186 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 FCGR3AP08637 254 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 TNFRSF9Q07011 255 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 PMS2P11Q13670 270 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 SPHARQ15513 63 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 FAM3DQ96BQ1 224 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 FBXL7Q9UJT9 491 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 TP53TG1Q9Y2A0 90 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 KCNK7Q9Y2U2 307 aa13.12□□□□□ -0.31
TMEM53-209ENST00000495630 KLK5Q9Y337 293 aaPredicted RBP13.12□□□□□ -0.31
TMEM53-209ENST00000495630 AK6Q9Y3D8 172 aaKnown RBP13.12□□□□□ -0.31
TMEM53-209ENST00000495630 ZNF320A2RRD8 509 aa13.11□□□□□ -0.31
TMEM53-209ENST00000495630 DENRO43583 198 aaKnown RBP13.11□□□□□ -0.31
TMEM53-209ENST00000495630 GNAO1P09471 354 aa13.11□□□□□ -0.31
TMEM53-209ENST00000495630 Q6ZWC4 215 aa13.11□□□□□ -0.31
TMEM53-209ENST00000495630 UXS1Q8NBZ7 420 aa13.11□□□□□ -0.31
TMEM53-209ENST00000495630 RAB3CQ96E17 227 aa13.11□□□□□ -0.31
TMEM53-209ENST00000495630 GINS4Q9BRT9 223 aa13.11□□□□□ -0.31
TMEM53-209ENST00000495630 MLXQ9UH92 298 aa13.11□□□□□ -0.31
TMEM53-209ENST00000495630 RAB22AQ9UL26 194 aa13.11□□□□□ -0.31
TMEM53-209ENST00000495630 TRAV25A0A0B4J276 109 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 A0A0J9YWU9 116 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 SAA1P0DJI8 122 aaPredicted RBP13.1□□□□□ -0.31
TMEM53-209ENST00000495630 ATF4P18848 351 aaPredicted RBP13.1□□□□□ -0.31
TMEM53-209ENST00000495630 BMI1P35226 326 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 ARL3P36405 182 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 TM4SF20Q53R12 229 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 OR4A47Q6IF82 309 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 CACNG8Q8WXS5 425 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 TMEM203Q969S6 136 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 DCUN1D5Q9BTE7 237 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 OR51E2Q9H255 320 aa13.1□□□□□ -0.31
TMEM53-209ENST00000495630 LSM2Q9Y333 95 aaKnown RBP13.1□□□□□ -0.31
TMEM53-209ENST00000495630 TMEM213A2RRL7 107 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 HMX3A6NHT5 357 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 NPIPB5A8MRT5 1133 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 A8MWP6 167 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 SPRY2O43597 315 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 ARL6IP5O75915 188 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 SCAF4O95104 1147 aaKnown RBP13.09□□□□□ -0.31
TMEM53-209ENST00000495630 PSMD7P51665 324 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 CLDN12P56749 244 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 KLK9Q2XQG4 91 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 C10orf55Q5SWW7 151 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 CLEC19AQ6UXS0 136 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 TMEM91Q6ZNR0 172 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 LYG2Q86SG7 212 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 H1FOOQ8IZA3 346 aaPredicted RBP13.09□□□□□ -0.31
TMEM53-209ENST00000495630 SLC2A9Q9NRM0 540 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 KLK9Q9UKQ9 250 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 PRELID3BQ9Y3B1 194 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 SELENOKQ9Y6D0 94 aa13.09□□□□□ -0.31
TMEM53-209ENST00000495630 DPPA5A6NC42 116 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 TEX22C9J3V5 150 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 UBE2CO00762 179 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 FCGR3BO75015 233 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 CRYGCP07315 174 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 EWSR1Q01844 656 aaKnown RBP eCLIP13.08□□□□□ -0.32
TMEM53-209ENST00000495630 MED22Q15528 200 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 TRAM1Q15629 374 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 LIPKQ5VXJ0 399 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 Q6ZS49 121 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 UFD1Q92890 307 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 MARC2Q969Z3 335 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 CCDC140Q96MF4 163 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 FANCD2OSQ96PS1 177 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 V9GY05 133 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 FRAS1Q86XX4 4008 aa13.08□□□□□ -0.32
TMEM53-209ENST00000495630 TMEM272A0A1B0GTI8 110 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 PTGES3LE9PB15 166 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 DHFRP00374 187 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 IL6RP08887 468 aaPredicted RBP13.07□□□□□ -0.32
TMEM53-209ENST00000495630 C8orf88P0DMB2 117 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 GADD45AP24522 165 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 MAS1LP35410 378 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 APOC4P55056 127 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 SSX1Q16384 188 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 OR10R2Q8NGX6 335 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 VSTM2AQ8TAG5 236 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 MAFIPQ8WZ33 124 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 EEF1AKMT3Q96AZ1 226 aa13.07□□□□□ -0.32
TMEM53-209ENST00000495630 TRBV7-1A0A0A6YYK4 115 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 SLC22A5O76082 557 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 IGHV3-23P01764 117 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 CLEC3BP05452 202 aa13.06□□□□□ -0.32
TMEM53-209ENST00000495630 ZNF735P0CB33 412 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms