RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 RAB9BQ9NP90 201 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 WSB1Q9Y6I7 421 aa15.36■□□□□ 0.05
TSPAN4-212ENST00000494815 DSCAMO60469 2012 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 PLAUP00749 431 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 VAMP2P63027 116 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 CDPF1Q6NVV7 123 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 SPNS3Q6ZMD2 512 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 SLC35E3Q7Z769 313 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 DCTN5Q9BTE1 182 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 HIPK2Q9H2X6 1198 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 LIN7CQ9NUP9 197 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 JPT1Q9UK76 154 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 ACACBO00763 2458 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 TGIF2-C20orf24A0A0A6YYL0 155 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 NKX6-3A6NJ46 265 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 RNF212BA8MTL3 300 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 DEFB108AA8MXU0 73 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 TMEM178BH3BS89 294 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 GYPAP02724 150 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 VDAC1P21796 283 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 DYNLT3P51808 116 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 BAXQ07812 192 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF672Q499Z4 452 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 C4orf17Q53FE4 359 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 ZNF808Q8N4W9 903 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 OR51H1Q8NH63 302 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 CLDND2Q8NHS1 167 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 URGCP-MRPS24S4R325 110 aa15.35■□□□□ 0.05
TSPAN4-212ENST00000494815 RELNP78509 3460 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 ELOA3CA0A087WX78 387 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 HBE1P02100 147 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 SERPINE2P07093 398 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 LOXP28300 417 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 PCP4P48539 62 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 ODF3L1Q8IXM7 274 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 RFESDQ8TAC1 157 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 CCL13Q99616 98 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 C2orf88Q9BSF0 95 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 PRDM13Q9H4Q3 707 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 TMEM106BQ9NUM4 274 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 CBY1Q9Y3M2 126 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 HIVEP3Q5T1R4 2406 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 F2RL2O00254 374 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 CYB5BO43169 146 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 MMP9P14780 707 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 TLE4Q04727 773 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 KHDC3LQ587J8 217 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 NMSQ5H8A3 153 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 DNLZQ5SXM8 178 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 AKR1C8PQ5T2L2 129 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 CYB5R2Q6BCY4 276 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 DPPA3Q6W0C5 159 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 MUC15Q8N387 334 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 OR10D4PQ8NGN7 298 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 MAGT1Q9H0U3 335 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 OR2D2Q9H210 308 aa15.34■□□□□ 0.05
TSPAN4-212ENST00000494815 PPIAL4EA0A075B759 164 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 CLEC18AA5D8T8 446 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 PPIAL4DF5H284 164 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 TCAPO15273 167 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 PPIAL4FP0DN26 164 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 CGB3P0DN86 165 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 CGB7P0DN87 165 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 HIST3H2BBQ8N257 126 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 CLEC18CQ8NCF0 446 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 GFOD1Q9NXC2 390 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 PPIAL4AQ9Y536 164 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 KALRNO60229 2985 aa15.33■□□□□ 0.04
TSPAN4-212ENST00000494815 B4DEV8 164 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 PPP1R2P9O14990 202 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 ADAM20O43506 726 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 HIST1H1BP16401 226 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 CXorf66Q5JRM2 361 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 DUX4L9Q6RFH8 374 aaPredicted RBP15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 FAM216BQ8N7L0 139 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 OR10G4Q8NGN3 311 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 CCL17Q92583 94 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 CALYQ9NYX4 217 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 ARFGEF3Q5TH69 2177 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 TRGV10A0A0A0MS01 117 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 YPEL1O60688 119 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 CST7O76096 145 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 TRGC2P03986 189 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 EPHA1P21709 976 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 RPL23AP62750 156 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 RUNX1Q01196 453 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 YPEL2Q96QA6 119 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 GNG12Q9UBI6 72 aa15.32■□□□□ 0.04
TSPAN4-212ENST00000494815 TMPRSS2O15393 492 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 SOD3P08294 240 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 ID3Q02535 119 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 IGHV3-43A0A0B4J1X8 118 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 KBTBD11-OT1A0A1B0GTJ5 212 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 LOC102723971A0A1B0GUV8 181 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 CLDN14O95500 239 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 TMEM50AO95807 157 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 IGHV3-43DP0DP04 118 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 LOXL3P58215 753 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 CD81P60033 236 aa15.31■□□□□ 0.04
TSPAN4-212ENST00000494815 EIF4EBP1Q13541 118 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms