RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZNF430Q9H8G1 570 aaPredicted RBP17.63■□□□□ 0.41
COL27A1-208ENST00000494780 CSMD3Q7Z407 3707 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 IGKV1D-8A0A087WSZ0 117 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 ANKRD65E5RJM6 399 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 BMPR1BO00238 502 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 TUSC2O75896 110 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 ACTL6BO94805 426 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 SAA1P0DJI8 122 aaPredicted RBP17.62■□□□□ 0.41
COL27A1-208ENST00000494780 RAB3BP20337 219 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 DTYMKP23919 212 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 ZNF45Q02386 682 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 MMD2Q8IY49 270 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 TTC9CQ8N5M4 171 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 ZNF645Q8N7E2 425 aa17.62■□□□□ 0.41
COL27A1-208ENST00000494780 PRH1P02810 166 aa17.61■□□□□ 0.41
COL27A1-208ENST00000494780 FAM209BQ5JX69 171 aa17.61■□□□□ 0.41
COL27A1-208ENST00000494780 LAX1Q8IWV1 398 aa17.61■□□□□ 0.41
COL27A1-208ENST00000494780 NDUFB11Q9NX14 153 aa17.61■□□□□ 0.41
COL27A1-208ENST00000494780 SACSQ9NZJ4 4579 aa17.6■□□□□ 0.41
COL27A1-208ENST00000494780 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.6■□□□□ 0.41
COL27A1-208ENST00000494780 TRDV1A0A1B0GX56 115 aa17.6■□□□□ 0.41
COL27A1-208ENST00000494780 CTXN2P0C2S0 81 aa17.6■□□□□ 0.41
COL27A1-208ENST00000494780 NECAP1Q8NC96 275 aa17.6■□□□□ 0.41
COL27A1-208ENST00000494780 DCUN1D5Q9BTE7 237 aa17.6■□□□□ 0.41
COL27A1-208ENST00000494780 ATG5Q9H1Y0 275 aa17.6■□□□□ 0.41
COL27A1-208ENST00000494780 PRELID3BQ9Y3B1 194 aa17.6■□□□□ 0.41
COL27A1-208ENST00000494780 OR2W1Q9Y3N9 320 aa17.6■□□□□ 0.41
COL27A1-208ENST00000494780 LYSTQ99698 3801 aa17.59■□□□□ 0.41
COL27A1-208ENST00000494780 FCGR3BO75015 233 aa17.59■□□□□ 0.41
COL27A1-208ENST00000494780 SLC22A5O76082 557 aa17.59■□□□□ 0.41
COL27A1-208ENST00000494780 CD300EQ496F6 205 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-208ENST00000494780 LINC00322Q6ZN03 302 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-208ENST00000494780 KCTD9Q7L273 389 aa17.59■□□□□ 0.41
COL27A1-208ENST00000494780 SLC25A42Q86VD7 318 aa17.59■□□□□ 0.41
COL27A1-208ENST00000494780 KCTD12Q96CX2 325 aaKnown RBP17.59■□□□□ 0.41
COL27A1-208ENST00000494780 ELF5Q9UKW6 265 aaPredicted RBP17.59■□□□□ 0.41
COL27A1-208ENST00000494780 MRPS7Q9Y2R9 242 aaKnown RBP17.59■□□□□ 0.41
COL27A1-208ENST00000494780 CEPT1Q9Y6K0 416 aa17.59■□□□□ 0.41
COL27A1-208ENST00000494780 STARD9Q9P2P6 4700 aa17.59■□□□□ 0.41
COL27A1-208ENST00000494780 HLA-DQB1P01920 261 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 CD36P16671 472 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 GALP22466 123 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 CD81P60033 236 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 CDNFQ49AH0 187 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 ADAMTSL5Q6ZMM2 481 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 NEURL2Q9BR09 285 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 DCSTAMPQ9H295 470 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 PLEKHA3Q9HB20 300 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 SLC2A8Q9NY64 477 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 BLOC1S6Q9UL45 172 aa17.58■□□□□ 0.4
COL27A1-208ENST00000494780 RBMX2Q9Y388 322 aaKnown RBP17.58■□□□□ 0.4
COL27A1-208ENST00000494780 J3QRK9 145 aa17.57■□□□□ 0.4
COL27A1-208ENST00000494780 TPPPO94811 219 aa17.57■□□□□ 0.4
COL27A1-208ENST00000494780 C15orf32Q32M92 178 aa17.57■□□□□ 0.4
COL27A1-208ENST00000494780 C10orf55Q5SWW7 151 aa17.57■□□□□ 0.4
COL27A1-208ENST00000494780 HACD4Q5VWC8 232 aa17.57■□□□□ 0.4
COL27A1-208ENST00000494780 ST6GALNAC5Q9BVH7 336 aa17.57■□□□□ 0.4
COL27A1-208ENST00000494780 OR51E2Q9H255 320 aa17.57■□□□□ 0.4
COL27A1-208ENST00000494780 ZNF257Q9Y2Q1 563 aa17.57■□□□□ 0.4
COL27A1-208ENST00000494780 ZNF785A8K8V0 405 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 OR2J3O76001 311 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 NFYAP23511 347 aaPredicted RBP17.56■□□□□ 0.4
COL27A1-208ENST00000494780 RPL30P62888 115 aaKnown RBP17.56■□□□□ 0.4
COL27A1-208ENST00000494780 C22orf42Q6IC83 251 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 NR2C2APQ86WQ0 139 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 IL17DQ8TAD2 202 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 DYNLRB2Q8TF09 96 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 HIPK2Q9H2X6 1198 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 VCX3BQ9H321 246 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 DMRT1Q9Y5R6 373 aa17.56■□□□□ 0.4
COL27A1-208ENST00000494780 IGLV2-14P01704 120 aa17.55■□□□□ 0.4
COL27A1-208ENST00000494780 HSPA13P48723 471 aa17.55■□□□□ 0.4
COL27A1-208ENST00000494780 DEFB114Q30KQ6 69 aa17.55■□□□□ 0.4
COL27A1-208ENST00000494780 VSTM2AQ8TAG5 236 aa17.55■□□□□ 0.4
COL27A1-208ENST00000494780 HSD17B10Q99714 261 aaKnown RBP17.55■□□□□ 0.4
COL27A1-208ENST00000494780 RETNQ9HD89 108 aa17.55■□□□□ 0.4
COL27A1-208ENST00000494780 DNAH1Q9P2D7 4330 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 C2orf70A6NJV1 201 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 NPIPB5A8MRT5 1133 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 TEX22C9J3V5 150 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 GGCTO75223 188 aaKnown RBP17.54■□□□□ 0.4
COL27A1-208ENST00000494780 KIR2DS2P43631 304 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 OR2B11Q5JQS5 317 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 CNIH2Q6PI25 160 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 VKORC1L1Q8N0U8 176 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 OR4S2Q8NH73 311 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 CNBD2Q96M20 576 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 OR2A7Q96R45 310 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 ZC4H2Q9NQZ6 224 aa17.54■□□□□ 0.4
COL27A1-208ENST00000494780 TECRQ9NZ01 308 aaKnown RBP17.54■□□□□ 0.4
COL27A1-208ENST00000494780 IGKV1D-13A0A0B4J2D9 117 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 HMX3A6NHT5 357 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 NOTOA8MTQ0 251 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 PPP5D1E7EU14 171 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 LGALS9O00182 355 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 SCGNO76038 276 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 KBTBD11O94819 623 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 CD7P09564 240 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 IGKV1-13P0DP09 117 aa17.53■□□□□ 0.4
COL27A1-208ENST00000494780 FOLR2P14207 255 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms