RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 H3BUA1 57 aa25.65■■□□□ 1.7
CBX4-203ENST00000494546 NCS1P62166 190 aa25.65■■□□□ 1.7
CBX4-203ENST00000494546 OR13F1Q8NGS4 319 aa25.65■■□□□ 1.7
CBX4-203ENST00000494546 SNAPC3Q92966 411 aa25.65■■□□□ 1.7
CBX4-203ENST00000494546 IFT46Q9NQC8 304 aa25.65■■□□□ 1.7
CBX4-203ENST00000494546 C13orf42A0A1B0GVH6 325 aa25.64■■□□□ 1.7
CBX4-203ENST00000494546 HSPB1P04792 205 aaKnown RBP25.64■■□□□ 1.7
CBX4-203ENST00000494546 EIF4EBP1Q13541 118 aaPredicted RBP25.64■■□□□ 1.7
CBX4-203ENST00000494546 TMEM69Q5SWH9 247 aa25.64■■□□□ 1.7
CBX4-203ENST00000494546 SLC25A46Q96AG3 418 aa25.64■■□□□ 1.7
CBX4-203ENST00000494546 GPHA2Q96T91 129 aa25.64■■□□□ 1.7
CBX4-203ENST00000494546 CCL28Q9NRJ3 127 aa25.64■■□□□ 1.7
CBX4-203ENST00000494546 PPYP01298 95 aa25.63■■□□□ 1.69
CBX4-203ENST00000494546 CDK10Q15131 360 aa25.63■■□□□ 1.69
CBX4-203ENST00000494546 MFSD4AQ8N468 514 aa25.63■■□□□ 1.69
CBX4-203ENST00000494546 OR4S2Q8NH73 311 aa25.63■■□□□ 1.69
CBX4-203ENST00000494546 SRSF12Q8WXF0 261 aaKnown RBP25.63■■□□□ 1.69
CBX4-203ENST00000494546 PRR25Q96S07 402 aa25.63■■□□□ 1.69
CBX4-203ENST00000494546 ZNF430Q9H8G1 570 aaPredicted RBP25.63■■□□□ 1.69
CBX4-203ENST00000494546 COA4Q9NYJ1 87 aa25.63■■□□□ 1.69
CBX4-203ENST00000494546 TNFSF12O43508 249 aa25.62■■□□□ 1.69
CBX4-203ENST00000494546 CREBL2O60519 120 aaPredicted RBP25.62■■□□□ 1.69
CBX4-203ENST00000494546 ACTL6BO94805 426 aa25.62■■□□□ 1.69
CBX4-203ENST00000494546 INSL3P51460 131 aa25.62■■□□□ 1.69
CBX4-203ENST00000494546 TAS2R20P59543 309 aa25.62■■□□□ 1.69
CBX4-203ENST00000494546 VBP1P61758 197 aa25.62■■□□□ 1.69
CBX4-203ENST00000494546 ZNF66Q6ZN08 573 aa25.62■■□□□ 1.69
CBX4-203ENST00000494546 VKORC1L1Q8N0U8 176 aa25.62■■□□□ 1.69
CBX4-203ENST00000494546 OR5AP2Q8NGF4 316 aa25.62■■□□□ 1.69
CBX4-203ENST00000494546 MPPED1O15442 326 aa25.61■■□□□ 1.69
CBX4-203ENST00000494546 FXYD4P59646 89 aa25.61■■□□□ 1.69
CBX4-203ENST00000494546 SLC5A7Q9GZV3 580 aa25.61■■□□□ 1.69
CBX4-203ENST00000494546 A0A0G2JLM5 398 aa25.6■■□□□ 1.69
CBX4-203ENST00000494546 DEFA5Q01523 94 aa25.6■■□□□ 1.69
CBX4-203ENST00000494546 KCTD12Q96CX2 325 aaKnown RBP25.6■■□□□ 1.69
CBX4-203ENST00000494546 TINAGL1Q9GZM7 467 aaPredicted RBP25.6■■□□□ 1.69
CBX4-203ENST00000494546 SAP30O75446 220 aa25.59■■□□□ 1.69
CBX4-203ENST00000494546 DCTN2Q13561 401 aaKnown RBP25.59■■□□□ 1.69
CBX4-203ENST00000494546 ZNF429Q86V71 674 aa25.59■■□□□ 1.69
CBX4-203ENST00000494546 MMD2Q8IY49 270 aa25.59■■□□□ 1.69
CBX4-203ENST00000494546 COMMD3Q9UBI1 195 aa25.59■■□□□ 1.69
CBX4-203ENST00000494546 BRWD1-AS2P59051 145 aa25.58■■□□□ 1.69
CBX4-203ENST00000494546 MSMO1Q15800 293 aa25.58■■□□□ 1.69
CBX4-203ENST00000494546 C10orf55Q5SWW7 151 aa25.58■■□□□ 1.69
CBX4-203ENST00000494546 ZNF256Q9Y2P7 627 aaPredicted RBP25.58■■□□□ 1.69
CBX4-203ENST00000494546 ANKRD34BA5PLL1 514 aa25.57■■□□□ 1.68
CBX4-203ENST00000494546 EIF4EP06730 217 aaKnown RBP25.57■■□□□ 1.68
CBX4-203ENST00000494546 OR9G9P0C7N8 305 aa25.57■■□□□ 1.68
CBX4-203ENST00000494546 CD69Q07108 199 aa25.57■■□□□ 1.68
CBX4-203ENST00000494546 TMEM17Q86X19 198 aa25.57■■□□□ 1.68
CBX4-203ENST00000494546 GIMAP1Q8WWP7 306 aa25.57■■□□□ 1.68
CBX4-203ENST00000494546 RANGRFQ9HD47 186 aaPredicted RBP25.57■■□□□ 1.68
CBX4-203ENST00000494546 EHFQ9NZC4 300 aa25.57■■□□□ 1.68
CBX4-203ENST00000494546 LY86O95711 162 aa25.56■■□□□ 1.68
CBX4-203ENST00000494546 SMIM18P0DKX4 95 aa25.56■■□□□ 1.68
CBX4-203ENST00000494546 KIR2DS2P43631 304 aa25.56■■□□□ 1.68
CBX4-203ENST00000494546 ZBTB34Q8NCN2 500 aa25.56■■□□□ 1.68
CBX4-203ENST00000494546 ADAD2Q8NCV1 583 aaKnown RBP25.56■■□□□ 1.68
CBX4-203ENST00000494546 VSTM2AQ8TAG5 236 aa25.56■■□□□ 1.68
CBX4-203ENST00000494546 SPIN2AQ99865 258 aa25.56■■□□□ 1.68
CBX4-203ENST00000494546 SPIN2BQ9BPZ2 258 aa25.56■■□□□ 1.68
CBX4-203ENST00000494546 OR2A4O95047 310 aa25.55■■□□□ 1.68
CBX4-203ENST00000494546 BRI3O95415 125 aa25.55■■□□□ 1.68
CBX4-203ENST00000494546 PRSS3P35030 304 aa25.55■■□□□ 1.68
CBX4-203ENST00000494546 HERV-K104P61576 105 aa25.55■■□□□ 1.68
CBX4-203ENST00000494546 OR2A7Q96R45 310 aa25.55■■□□□ 1.68
CBX4-203ENST00000494546 KBTBD11O94819 623 aa25.54■■□□□ 1.68
CBX4-203ENST00000494546 RFX2P48378 723 aa25.54■■□□□ 1.68
CBX4-203ENST00000494546 ACSM6Q6P461 480 aa25.54■■□□□ 1.68
CBX4-203ENST00000494546 SSX9Q7RTT3 188 aa25.54■■□□□ 1.68
CBX4-203ENST00000494546 ANAPC10Q9UM13 185 aa25.54■■□□□ 1.68
CBX4-203ENST00000494546 SULT1C2O00338 296 aa25.53■■□□□ 1.68
CBX4-203ENST00000494546 HRASP01112 189 aa25.53■■□□□ 1.68
CBX4-203ENST00000494546 PMP2P02689 132 aa25.53■■□□□ 1.68
CBX4-203ENST00000494546 ZNF818PQ6ZRF7 136 aa25.53■■□□□ 1.68
CBX4-203ENST00000494546 SPAG16Q8N0X2 631 aa25.53■■□□□ 1.68
CBX4-203ENST00000494546 PUSL1Q8N0Z8 303 aaKnown RBP25.53■■□□□ 1.68
CBX4-203ENST00000494546 USMG5Q96IX5 58 aa25.53■■□□□ 1.68
CBX4-203ENST00000494546 B9D2Q9BPU9 175 aa25.53■■□□□ 1.68
CBX4-203ENST00000494546 NAA50Q9GZZ1 169 aaKnown RBP25.53■■□□□ 1.68
CBX4-203ENST00000494546 TNCP24821 2201 aa25.53■■□□□ 1.68
CBX4-203ENST00000494546 SMIM31A0A1B0GVY4 71 aa25.52■■□□□ 1.68
CBX4-203ENST00000494546 APOA1P02647 267 aa25.52■■□□□ 1.68
CBX4-203ENST00000494546 PRH1P02810 166 aa25.52■■□□□ 1.68
CBX4-203ENST00000494546 ZP3P21754 424 aa25.52■■□□□ 1.68
CBX4-203ENST00000494546 CATR1Q13166 79 aa25.52■■□□□ 1.68
CBX4-203ENST00000494546 DYRK1AQ13627 763 aa25.52■■□□□ 1.68
CBX4-203ENST00000494546 OR5H2Q8NGV7 314 aa25.52■■□□□ 1.68
CBX4-203ENST00000494546 TMEM167AQ8TBQ9 72 aa25.52■■□□□ 1.68
CBX4-203ENST00000494546 LSM4Q9Y4Z0 139 aaKnown RBP25.52■■□□□ 1.68
CBX4-203ENST00000494546 RBMXL2O75526 392 aaKnown RBP25.51■■□□□ 1.67
CBX4-203ENST00000494546 RORCP51449 518 aa25.51■■□□□ 1.67
CBX4-203ENST00000494546 TAS2R46P59540 309 aa25.51■■□□□ 1.67
CBX4-203ENST00000494546 OR4C12Q96R67 309 aa25.51■■□□□ 1.67
CBX4-203ENST00000494546 ZNF2Q9BSG1 426 aaPredicted RBP25.51■■□□□ 1.67
CBX4-203ENST00000494546 NAT1P18440 290 aa25.5■■□□□ 1.67
CBX4-203ENST00000494546 RHOGP84095 191 aa25.5■■□□□ 1.67
CBX4-203ENST00000494546 ZNF343Q6P1L6 599 aa25.5■■□□□ 1.67
CBX4-203ENST00000494546 OR51H1Q8NH63 302 aa25.5■■□□□ 1.67
CBX4-203ENST00000494546 CMTM3Q96MX0 182 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms