RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 SIX6O95475 246 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 MOSP00540 346 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 FAM106CPP0CH98 169 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 TRAPPC2P0DI81 140 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 TRAPPC2BP0DI82 140 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 HLA-GP17693 338 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 HNF4GQ14541 408 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 POU2AF1Q16633 256 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 DEFB112Q30KQ8 113 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 H2BFWTQ7Z2G1 175 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 OR5M8Q8NGP6 311 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 LSM10Q969L4 123 aaKnown RBP11.31□□□□□ -0.6
UBE3C-207ENST00000494532 GPR146Q96CH1 333 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 SEC22AQ96IW7 307 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 RHOVQ96L33 236 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 TSNAXQ99598 290 aaKnown RBP11.31□□□□□ -0.6
UBE3C-207ENST00000494532 RNF5Q99942 180 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 MMP24Q9Y5R2 645 aa11.31□□□□□ -0.6
UBE3C-207ENST00000494532 ZANQ9Y493 2812 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 TMEM11P17152 192 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 CXCL3P19876 107 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 LGALS7P47929 136 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 DYNLT3P51808 116 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 VMA21Q3ZAQ7 101 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 NMSQ5H8A3 153 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 THOC7Q6I9Y2 204 aaKnown RBP11.3□□□□□ -0.6
UBE3C-207ENST00000494532 THNSL2Q86YJ6 484 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 FAM219AQ8IW50 185 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 VKORC1L1Q8N0U8 176 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 CHAC2Q8WUX2 184 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 ZDHHC16Q969W1 377 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 EAF1Q96JC9 268 aaPredicted RBP11.3□□□□□ -0.6
UBE3C-207ENST00000494532 RITA1Q96K30 269 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 SPIN2AQ99865 258 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 SSX3Q99909 188 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 SPIN2BQ9BPZ2 258 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 PDCD10Q9BUL8 212 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 CSPG4Q6UVK1 2322 aa11.3□□□□□ -0.6
UBE3C-207ENST00000494532 A0A0G2JRQ6 117 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 SRRM4A7MD48 611 aaKnown RBP11.29□□□□□ -0.6
UBE3C-207ENST00000494532 MPTX1A8MV57 137 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 IGLV2-23P01705 113 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 SAA1P0DJI8 122 aaPredicted RBP11.29□□□□□ -0.6
UBE3C-207ENST00000494532 CNTFRP26992 372 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 EBI3Q14213 229 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 AANATQ16613 207 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 IZUMO4Q1ZYL8 232 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 IAH1Q2TAA2 248 aaPredicted RBP11.29□□□□□ -0.6
UBE3C-207ENST00000494532 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 VSTM2AQ8TAG5 236 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 OR10C1Q96KK4 312 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 C2orf50Q96LR7 162 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 ZNF436Q9C0F3 470 aaPredicted RBP11.29□□□□□ -0.6
UBE3C-207ENST00000494532 OTOGQ6ZRI0 2925 aa11.29□□□□□ -0.6
UBE3C-207ENST00000494532 H3BUX3 64 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 SLC25A17O43808 307 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 SPDEFO95238 335 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 P0C879 139 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 SLC25A6P12236 298 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 H2BFSP57053 126 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 UBE2KP61086 200 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 CD83Q01151 205 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 SMCO1Q147U7 214 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 PSG5Q15238 335 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 MMDQ15546 238 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 FBLN7Q53RD9 439 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 Q8N6K4 173 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 RANBP3Q9H6Z4 567 aaPredicted RBP11.28□□□□□ -0.6
UBE3C-207ENST00000494532 GSKIPQ9P0R6 139 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 KIAA1456Q9P272 454 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 CACNG5Q9UF02 275 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
UBE3C-207ENST00000494532 ZNF469Q96JG9 3925 aaPredicted RBP11.27□□□□□ -0.6
UBE3C-207ENST00000494532 A0A1B0GU03 582 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 NBR2O15453 112 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 RBMXL2O75526 392 aaKnown RBP11.27□□□□□ -0.61
UBE3C-207ENST00000494532 CCNKO75909 580 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 SNAPC5O75971 98 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 KBTBD11O94819 623 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 OR2A4O95047 310 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 GIPP09681 153 aaPredicted RBP11.27□□□□□ -0.61
UBE3C-207ENST00000494532 OR9G9P0C7N8 305 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 F2RL1P55085 397 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 SCGB2A2Q13296 93 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 PLGLAQ15195 96 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 AKAP14Q86UN6 197 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 PUSL1Q8N0Z8 303 aaKnown RBP11.27□□□□□ -0.61
UBE3C-207ENST00000494532 TEX45Q8NA69 505 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 ZBTB8BQ8NAP8 495 aaPredicted RBP11.27□□□□□ -0.61
UBE3C-207ENST00000494532 OR4A16Q8NH70 328 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 OR4A5Q8NH83 315 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 OR1S1Q8NH92 325 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 PIFOQ8TCI5 191 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 ZNF48Q96MX3 618 aaPredicted RBP11.27□□□□□ -0.61
UBE3C-207ENST00000494532 OR2A7Q96R45 310 aa11.27□□□□□ -0.61
UBE3C-207ENST00000494532 GSX1Q9H4S2 264 aaPredicted RBP11.27□□□□□ -0.61
UBE3C-207ENST00000494532 BET1LQ9NYM9 111 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms