RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 UBE2KP61086 200 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 ATP5G2Q06055 141 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 GUCA2BQ16661 112 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 DDB2Q92466 427 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 DCUN1D5Q9BTE7 237 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 HIPK2Q9H2X6 1198 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 VCXQ9H320 206 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 ZNF430Q9H8G1 570 aaPredicted RBP9.56□□□□□ -0.88
SKA1-205ENST00000494518 PEMTQ9UBM1 199 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 ELF5Q9UKW6 265 aaPredicted RBP9.56□□□□□ -0.88
SKA1-205ENST00000494518 RAB22AQ9UL26 194 aa9.56□□□□□ -0.88
SKA1-205ENST00000494518 SMIM30A4D0T7 59 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 RBMY1BA6NDE4 496 aaKnown RBP9.55□□□□□ -0.88
SKA1-205ENST00000494518 RBMY1EA6NEQ0 496 aaKnown RBP9.55□□□□□ -0.88
SKA1-205ENST00000494518 MFNGO00587 321 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 RGS10O43665 173 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 OR2J3O76001 311 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 TPPPO94811 219 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 BRI3O95415 125 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 IGHV3-23P01764 117 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 RBMY1DP0C7P1 496 aaKnown RBP9.55□□□□□ -0.88
SKA1-205ENST00000494518 RRASP10301 218 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 MECP2P51608 486 aaKnown RBP9.55□□□□□ -0.88
SKA1-205ENST00000494518 AQP4P55087 323 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 ARFRP1Q13795 201 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 TRAM1Q15629 374 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 VKORC1L1Q8N0U8 176 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 TEX45Q8NA69 505 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 OR10R2Q8NGX6 335 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 SRD5A3Q9H8P0 318 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 SIGLEC8Q9NYZ4 499 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 NKX1-2Q9UD57 310 aaPredicted RBP9.55□□□□□ -0.88
SKA1-205ENST00000494518 TPRKBQ9Y3C4 175 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 S4R3C0 116 aa9.55□□□□□ -0.88
SKA1-205ENST00000494518 HMX3A6NHT5 357 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 FAM223BA6NKX1 122 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 ZNF785A8K8V0 405 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 FCGR3BO75015 233 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 TUSC2O75896 110 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 JTBO76095 146 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 ACTL6BO94805 426 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 HIST1H1DP16402 221 aaKnown RBP9.54□□□□□ -0.88
SKA1-205ENST00000494518 GADD45AP24522 165 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 PSMA1P25786 263 aaKnown RBP9.54□□□□□ -0.88
SKA1-205ENST00000494518 TALDO1P37837 337 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 MLLT11Q13015 90 aaPredicted RBP9.54□□□□□ -0.88
SKA1-205ENST00000494518 LINC00322Q6ZN03 302 aaPredicted RBP9.54□□□□□ -0.88
SKA1-205ENST00000494518 FAM223AQ8IWN6 122 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 H1FOOQ8IZA3 346 aaPredicted RBP9.54□□□□□ -0.88
SKA1-205ENST00000494518 CACNG8Q8WXS5 425 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 WDR89Q96FK6 387 aaPredicted RBP9.54□□□□□ -0.88
SKA1-205ENST00000494518 ADTRPQ96IZ2 230 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 MGLLQ99685 303 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 SLC2A8Q9NY64 477 aa9.54□□□□□ -0.88
SKA1-205ENST00000494518 FRAS1Q86XX4 4008 aa9.53□□□□□ -0.88
SKA1-205ENST00000494518 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.53□□□□□ -0.88
SKA1-205ENST00000494518 OR11H12B2RN74 326 aa9.53□□□□□ -0.88
SKA1-205ENST00000494518 RAB27BO00194 218 aa9.53□□□□□ -0.88
SKA1-205ENST00000494518 NFYAP23511 347 aaPredicted RBP9.53□□□□□ -0.88
SKA1-205ENST00000494518 RPL30P62888 115 aaKnown RBP9.53□□□□□ -0.88
SKA1-205ENST00000494518 CDK10Q15131 360 aa9.53□□□□□ -0.88
SKA1-205ENST00000494518 C15orf32Q32M92 178 aa9.53□□□□□ -0.88
SKA1-205ENST00000494518 KCTD9Q7L273 389 aa9.53□□□□□ -0.88
SKA1-205ENST00000494518 OR2K2Q8NGT1 345 aa9.53□□□□□ -0.88
SKA1-205ENST00000494518 OSR1Q8TAX0 266 aaPredicted RBP9.53□□□□□ -0.88
SKA1-205ENST00000494518 DUSP21Q9H596 190 aa9.53□□□□□ -0.88
SKA1-205ENST00000494518 TRBV9A0A0B4J1U6 114 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 C2orf70A6NJV1 201 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 AIREO43918 545 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 OR2C1O95371 312 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 FOLR2P14207 255 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 SSX1Q16384 188 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 DEFB114Q30KQ6 69 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 MMD2Q8IY49 270 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 NRG4Q8WWG1 115 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 FYTTD1Q96QD9 318 aaKnown RBP9.52□□□□□ -0.89
SKA1-205ENST00000494518 GPHA2Q96T91 129 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 SPIN2AQ99865 258 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 SPIN2BQ9BPZ2 258 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 ATG5Q9H1Y0 275 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 FBXL7Q9UJT9 491 aa9.52□□□□□ -0.89
SKA1-205ENST00000494518 IGKV1D-13A0A0B4J2D9 117 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 IFITM5A6NNB3 132 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 TEX22C9J3V5 150 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 E7EUB6 86 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 PDCD5O14737 125 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 IGKV1-13P0DP09 117 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 MYOD1P15172 320 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 MYL9P24844 172 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 PSMD7P51665 324 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 TTC9CQ8N5M4 171 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 ZNF645Q8N7E2 425 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 NECAP1Q8NC96 275 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 ST6GALNAC5Q9BVH7 336 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 ACOT13Q9NPJ3 140 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 ZC4H2Q9NQZ6 224 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 DMRT1Q9Y5R6 373 aa9.51□□□□□ -0.89
SKA1-205ENST00000494518 A0A1B0GW64 132 aa9.5□□□□□ -0.89
SKA1-205ENST00000494518 DPPA5A6NC42 116 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms