RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ZNF430Q9H8G1 570 aaPredicted RBP7.28□□□□□ -1.24
UBR4-216ENST00000494503 ZC4H2Q9NQZ6 224 aa7.28□□□□□ -1.24
UBR4-216ENST00000494503 SIGLEC8Q9NYZ4 499 aa7.28□□□□□ -1.24
UBR4-216ENST00000494503 NKX1-2Q9UD57 310 aaPredicted RBP7.28□□□□□ -1.24
UBR4-216ENST00000494503 MRPS7Q9Y2R9 242 aaKnown RBP7.28□□□□□ -1.24
UBR4-216ENST00000494503 V9GY05 133 aa7.28□□□□□ -1.24
UBR4-216ENST00000494503 BIRC6Q9NR09 4857 aa7.28□□□□□ -1.24
UBR4-216ENST00000494503 TRBV6-7A0A0A0MS04 114 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 HMX3A6NHT5 357 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 C2orf70A6NJV1 201 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 LINC00473A8K010 186 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 RAB27BO00194 218 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 GGCTO75223 188 aaKnown RBP7.27□□□□□ -1.25
UBR4-216ENST00000494503 OR2C1O95371 312 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 CRHBPP24387 322 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 DUTP33316 252 aaKnown RBP7.27□□□□□ -1.25
UBR4-216ENST00000494503 ARL3P36405 182 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 RANBP1P43487 201 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 ZNF45Q02386 682 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 PLA2G7Q13093 441 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 DEFB114Q30KQ6 69 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 CLEC19AQ6UXS0 136 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 C19orf35Q6ZS72 473 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 SLC25A42Q86VD7 318 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 MMD2Q8IY49 270 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 VKORC1L1Q8N0U8 176 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 NECAP1Q8NC96 275 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 OSR1Q8TAX0 266 aaPredicted RBP7.27□□□□□ -1.25
UBR4-216ENST00000494503 CABLES2Q9BTV7 478 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 FKBP14Q9NWM8 211 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 FBXL7Q9UJT9 491 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 RAB22AQ9UL26 194 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 PRELID3BQ9Y3B1 194 aa7.27□□□□□ -1.25
UBR4-216ENST00000494503 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
UBR4-216ENST00000494503 ZNF785A8K8V0 405 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 FOXI3A8MTJ6 420 aaPredicted RBP7.26□□□□□ -1.25
UBR4-216ENST00000494503 RGS10O43665 173 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 DEFA4P12838 97 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 CD36P16671 472 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 MYL9P24844 172 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 PSMA1P25786 263 aaKnown RBP7.26□□□□□ -1.25
UBR4-216ENST00000494503 PSMD7P51665 324 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 CDK10Q15131 360 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 TRAM1Q15629 374 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 ZNF57Q68EA5 555 aaPredicted RBP7.26□□□□□ -1.25
UBR4-216ENST00000494503 TMEM91Q6ZNR0 172 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 SSX9Q7RTT3 188 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 OR10R2Q8NGX6 335 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 TCTEX1D2Q8WW35 142 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 ST6GALNAC5Q9BVH7 336 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 GGTLC1Q9BX51 225 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 ATG5Q9H1Y0 275 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 TECRQ9NZ01 308 aaKnown RBP7.26□□□□□ -1.25
UBR4-216ENST00000494503 SPATA2Q9UM82 520 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 KCNK7Q9Y2U2 307 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 LSM2Q9Y333 95 aaKnown RBP7.26□□□□□ -1.25
UBR4-216ENST00000494503 TPRKBQ9Y3C4 175 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 DNAH1Q9P2D7 4330 aa7.26□□□□□ -1.25
UBR4-216ENST00000494503 METTL21EPA6NDL7 271 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 PDCD5O14737 125 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 DHFRP00374 187 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 REG1AP05451 166 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 HIST1H1DP16402 221 aaKnown RBP7.25□□□□□ -1.25
UBR4-216ENST00000494503 NFYAP23511 347 aaPredicted RBP7.25□□□□□ -1.25
UBR4-216ENST00000494503 KIR2DS2P43631 304 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 RPL27AP46776 148 aaKnown RBP7.25□□□□□ -1.25
UBR4-216ENST00000494503 OR10A3P58181 314 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 FABP5Q01469 135 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 MRGPRG-AS1Q2M3A8 158 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 FAM106AQ4KMX7 169 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 FAM209BQ5JX69 171 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 OGFRL1Q5TC84 451 aaPredicted RBP7.25□□□□□ -1.25
UBR4-216ENST00000494503 BTNL8Q6UX41 500 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 RBPMS2Q6ZRY4 209 aaKnown RBP7.25□□□□□ -1.25
UBR4-216ENST00000494503 H1FOOQ8IZA3 346 aaPredicted RBP7.25□□□□□ -1.25
UBR4-216ENST00000494503 TMEM61Q8N0U2 210 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 TTC9CQ8N5M4 171 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 ZNF645Q8N7E2 425 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 FBLIM1Q8WUP2 373 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 EEF1AKMT3Q96AZ1 226 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 ZNF257Q9Y2Q1 563 aa7.25□□□□□ -1.25
UBR4-216ENST00000494503 LOC102724200A0A096LPH7 203 aaPredicted RBP7.24□□□□□ -1.25
UBR4-216ENST00000494503 TRBV9A0A0B4J1U6 114 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 IGHV3-35A0A0C4DH35 117 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 SMIM30A4D0T7 59 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 ERICH4A6NGS2 130 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 MFNGO00587 321 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 CBLN1P23435 193 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 MAP2K4P45985 399 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 MLLT11Q13015 90 aaPredicted RBP7.24□□□□□ -1.25
UBR4-216ENST00000494503 ANKRD55Q3KP44 614 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 LINC00322Q6ZN03 302 aaPredicted RBP7.24□□□□□ -1.25
UBR4-216ENST00000494503 UXS1Q8NBZ7 420 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 OR4S2Q8NH73 311 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 VSTM2AQ8TAG5 236 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 LINC00476Q8WZB0 136 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 DDB2Q92466 427 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 CENPOQ9BU64 300 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 OR51E2Q9H255 320 aa7.24□□□□□ -1.25
UBR4-216ENST00000494503 HRASLSQ9HDD0 168 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms