RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CD40LGP29965 261 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 RAB25P57735 213 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 OR2B11Q5JQS5 317 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 IDO2Q6ZQW0 420 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 GPX8Q8TED1 209 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 CASTOR1Q8WTX7 329 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 DCUN1D5Q9BTE7 237 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 SLC5A7Q9GZV3 580 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 SCPEP1Q9HB40 452 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 EHFQ9NZC4 300 aa17.56■□□□□ 0.4
SNIP1-203ENST00000493916 LGALS1P09382 135 aaKnown RBP17.55■□□□□ 0.4
SNIP1-203ENST00000493916 OR8U8P0C7N1 319 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 KIR2DS2P43631 304 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 BRWD1-AS2P59051 145 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 ZNF616Q08AN1 781 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 DYRK1AQ13627 763 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 DHRS11Q6UWP2 260 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 OR1N2Q8NGR9 330 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 DPF1Q92782 380 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 OR5B12Q96R08 314 aa17.55■□□□□ 0.4
SNIP1-203ENST00000493916 BRI3O95415 125 aa17.54■□□□□ 0.4
SNIP1-203ENST00000493916 TPPP2P59282 170 aa17.54■□□□□ 0.4
SNIP1-203ENST00000493916 FXYD4P59646 89 aa17.54■□□□□ 0.4
SNIP1-203ENST00000493916 HERV-K104P61576 105 aa17.54■□□□□ 0.4
SNIP1-203ENST00000493916 ASPHD1Q5U4P2 390 aa17.54■□□□□ 0.4
SNIP1-203ENST00000493916 POC5Q8NA72 575 aa17.54■□□□□ 0.4
SNIP1-203ENST00000493916 OR5H2Q8NGV7 314 aa17.54■□□□□ 0.4
SNIP1-203ENST00000493916 ZNF430Q9H8G1 570 aaPredicted RBP17.54■□□□□ 0.4
SNIP1-203ENST00000493916 ADAM30Q9UKF2 790 aa17.54■□□□□ 0.4
SNIP1-203ENST00000493916 TNFSF12O43508 249 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 RFX2P48378 723 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 KRTAP10-11P60412 298 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 TNXAQ16473 311 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 MMD2Q8IY49 270 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 VSTM2AQ8TAG5 236 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 BORCS5Q969J3 196 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 MOB3AQ96BX8 217 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 MS4A10Q96PG2 267 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 GPHA2Q96T91 129 aa17.53■□□□□ 0.4
SNIP1-203ENST00000493916 SULT1C2O00338 296 aa17.52■□□□□ 0.4
SNIP1-203ENST00000493916 RBFOX2O43251 390 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNIP1-203ENST00000493916 PMP2P02689 132 aa17.52■□□□□ 0.4
SNIP1-203ENST00000493916 TRGV3P03979 118 aa17.52■□□□□ 0.4
SNIP1-203ENST00000493916 HOXD3P31249 432 aaPredicted RBP17.52■□□□□ 0.4
SNIP1-203ENST00000493916 ZNF818PQ6ZRF7 136 aa17.52■□□□□ 0.4
SNIP1-203ENST00000493916 TMEM17Q86X19 198 aa17.52■□□□□ 0.4
SNIP1-203ENST00000493916 SNX29P2Q8IUI4 249 aa17.52■□□□□ 0.4
SNIP1-203ENST00000493916 LYSMD2Q8IV50 215 aa17.52■□□□□ 0.4
SNIP1-203ENST00000493916 SRSF12Q8WXF0 261 aaKnown RBP17.52■□□□□ 0.4
SNIP1-203ENST00000493916 RHOVQ96L33 236 aa17.52■□□□□ 0.4
SNIP1-203ENST00000493916 ALX4Q9H161 411 aaPredicted RBP17.52■□□□□ 0.4
SNIP1-203ENST00000493916 FAM25AB3EWG3 89 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 FAM25CB3EWG5 89 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 FAM25GB3EWG6 89 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 RCVRNP35243 200 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 HRH1P35367 487 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 CATR1Q13166 79 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 PUSL1Q8N0Z8 303 aaKnown RBP17.51■□□□□ 0.39
SNIP1-203ENST00000493916 OR5T1Q8NG75 326 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 MRAPQ8TCY5 172 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 RAB2BQ8WUD1 216 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 PHB2Q99623 299 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 BCL7BQ9BQE9 202 aa17.51■□□□□ 0.39
SNIP1-203ENST00000493916 ZNF2Q9BSG1 426 aaPredicted RBP17.51■□□□□ 0.39
SNIP1-203ENST00000493916 MSGN1A6NI15 193 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 ACTL6BO94805 426 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 TPPPO94811 219 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 KBTBD11O94819 623 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 OR2A4O95047 310 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 HRASP01112 189 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 HLA-DMAP28067 261 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 GNRHRP30968 328 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 SPCS2Q15005 226 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 CLVS1Q8IUQ0 354 aaPredicted RBP17.5■□□□□ 0.39
SNIP1-203ENST00000493916 VKORC1L1Q8N0U8 176 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 SPAG16Q8N0X2 631 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 TMEM167AQ8TBQ9 72 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 OR2A7Q96R45 310 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 ZNF355PQ9NSJ1 428 aa17.5■□□□□ 0.39
SNIP1-203ENST00000493916 LINC01619G3V211 115 aa17.49■□□□□ 0.39
SNIP1-203ENST00000493916 RAMP3O60896 148 aa17.49■□□□□ 0.39
SNIP1-203ENST00000493916 C9orf66Q5T8R8 295 aa17.49■□□□□ 0.39
SNIP1-203ENST00000493916 SPIN2AQ99865 258 aa17.49■□□□□ 0.39
SNIP1-203ENST00000493916 SPIN2BQ9BPZ2 258 aa17.49■□□□□ 0.39
SNIP1-203ENST00000493916 AIFM2Q9BRQ8 373 aa17.49■□□□□ 0.39
SNIP1-203ENST00000493916 TINAGL1Q9GZM7 467 aaPredicted RBP17.49■□□□□ 0.39
SNIP1-203ENST00000493916 ZMAT5Q9UDW3 170 aaKnown RBP17.49■□□□□ 0.39
SNIP1-203ENST00000493916 A0A0G2JLM5 398 aa17.48■□□□□ 0.39
SNIP1-203ENST00000493916 SEC14L6B5MCN3 397 aa17.48■□□□□ 0.39
SNIP1-203ENST00000493916 IGHV3-11P01762 117 aa17.48■□□□□ 0.39
SNIP1-203ENST00000493916 TMBIM6P55061 237 aa17.48■□□□□ 0.39
SNIP1-203ENST00000493916 ADAD2Q8NCV1 583 aaKnown RBP17.48■□□□□ 0.39
SNIP1-203ENST00000493916 OR6F1Q8NGZ6 308 aa17.48■□□□□ 0.39
SNIP1-203ENST00000493916 CD300LFQ8TDQ1 290 aa17.48■□□□□ 0.39
SNIP1-203ENST00000493916 FXYD6Q9H0Q3 95 aa17.48■□□□□ 0.39
SNIP1-203ENST00000493916 EXTL2Q9UBQ6 330 aa17.48■□□□□ 0.39
SNIP1-203ENST00000493916 IGHV4OR15-8A0A075B7B6 117 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 A0A087WW49 117 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 C13orf42A0A1B0GVH6 325 aa17.47■□□□□ 0.39
SNIP1-203ENST00000493916 HSPB1P04792 205 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms