RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TIMM23BQ5SRD1 257 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 TEX45Q8NA69 505 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 OR9G1Q8NH87 305 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 MYEOVQ96EZ4 313 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 TTTY12Q9BZ98 90 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 IGKV3D-20A0A0C4DH25 116 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 A0A1B0GUT8 65 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 PQLC2LA1A4F0 135 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 MARCH11A6NNE9 402 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 PLNP26678 52 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 GPX4P36969 197 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 C2orf68Q2NKX9 166 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF48Q96MX3 618 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 NHP2Q9NX24 153 aaKnown RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 MYH15Q9Y2K3 1946 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 IGLV3-16A0A075B6K0 115 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 TRGV3P03979 118 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 DANCRP0C864 163 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 RNASE4P34096 147 aaKnown RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 UCP3P55916 312 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 RIPPLY3P57055 190 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 P2RY6Q15077 328 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 CLEC7AQ9BXN2 247 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 RPP21Q9H633 154 aaKnown RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 FNDC4Q9H6D8 234 aaPredicted RBP6.75□□□□□ -1.33
BRCA1-221ENST00000493795 GPR132Q9UNW8 380 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 R4GN57 208 aa6.75□□□□□ -1.33
BRCA1-221ENST00000493795 TRAV2A0A0B4J234 112 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 A0A1W2PPC1 479 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 MPTX1A8MV57 137 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 PGFP49763 221 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 PDLIM4P50479 330 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF585BQ52M93 769 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 VN1R4Q7Z5H5 301 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 FAM57AQ8TBR7 257 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 RBM38Q9H0Z9 239 aaKnown RBP6.74□□□□□ -1.33
BRCA1-221ENST00000493795 TRAV9-1A0A075B6T8 112 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 DTX2Q86UW9 622 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 ORMDL3Q8N138 153 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 NPIPB3Q92617 1050 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 ST20Q9HBF5 79 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 TCF19Q9Y242 345 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 IGHV1OR15-9A0A0B4J2B8 117 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 FAM27BQ5VT28 67 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 WDR54Q9H977 334 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 COX11Q9Y6N1 276 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 ANKRD12Q6UB98 2062 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 ODAMA1E959 279 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 M0R2P5 195 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 MOSP00540 346 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 HBDP02042 147 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 ZP4Q12836 540 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 DCAF10Q5QP82 559 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 FER1L6-AS1Q8NA97 138 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 APCDD1LQ8NCL9 501 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 OR4D11Q8NGI4 311 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 SHPRHQ149N8 1683 aa6.74□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF729A6NN14 1252 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-221ENST00000493795 SSBP2P81877 361 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-221ENST00000493795 PSG4Q00888 419 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF79Q15937 498 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 CIARTQ8N365 385 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-221ENST00000493795 HMGCLL1Q8TB92 370 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 ORAOV1Q8WV07 137 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 IL6RP08887 468 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-221ENST00000493795 IRF3Q14653 427 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 TMEM155Q4W5P6 130 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 FBLN7Q53RD9 439 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 TMEM91Q6ZNR0 172 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 BAZ2AQ9UIF9 1905 aaKnown RBP6.73□□□□□ -1.33
BRCA1-221ENST00000493795 KBTBD11-OT1A0A1B0GTJ5 212 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 SIGLEC14Q08ET2 396 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 PEAR1Q5VY43 1037 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-221ENST00000493795 PRDM13Q9H4Q3 707 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 LAMTOR2Q9Y2Q5 125 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 A0A0G2JLM5 398 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 SPINT1O43278 529 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 DPM2O94777 84 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 CTSSP25774 331 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF818PQ6ZRF7 136 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 PEMTQ9UBM1 199 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 IZUMO1RA6ND01 250 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 SNAI3Q3KNW1 292 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 MORN3Q6PF18 240 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-221ENST00000493795 LURAP1LQ8IV03 231 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 LAMTOR3Q9UHA4 124 aa6.73□□□□□ -1.33
BRCA1-221ENST00000493795 VIRMAQ69YN4 1812 aaKnown RBP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 NUP188Q5SRE5 1749 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 N4BP2Q86UW6 1770 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 ZIC3O60481 467 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 FOXH1O75593 365 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 HOXB3P14651 431 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 SFTA2Q6UW10 78 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 ZNF385AQ96PM9 386 aaKnown RBP6.72□□□□□ -1.33
BRCA1-221ENST00000493795 GDF15Q99988 308 aa6.72□□□□□ -1.33
BRCA1-221ENST00000493795 JPT2Q9H910 190 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms