RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 PRR13Q9NZ81 148 aa10.75□□□□□ -0.69
MSH6-208ENST00000493177 SHOXO15266 292 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 S1PR2O95136 353 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 HPRT1P00492 218 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 MOSP00540 346 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 IL5P05113 134 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 TMEM11P17152 192 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 MECP2P51608 486 aaKnown RBP10.74□□□□□ -0.69
MSH6-208ENST00000493177 TMEM187Q14656 261 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 LY6EQ16553 131 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 ZNF695Q8IW36 515 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 COQ8AQ8NI60 647 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 GALNT14Q96FL9 552 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 RNF114Q9Y508 228 aa10.74□□□□□ -0.69
MSH6-208ENST00000493177 CLPSL1A2RUU4 121 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 VGLL3A8MV65 326 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 RBFOX2O43251 390 aaKnown RBP eCLIP10.73□□□□□ -0.691e-6■□□□□ 8.9
MSH6-208ENST00000493177 NDUFA7O95182 113 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 IGKV1-16P04430 117 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 UCP1P25874 307 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 DYNLT3P51808 116 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 BRWD1-AS2P59051 145 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 ERVK-16P61578 105 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 SRPXP78539 464 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 HABP2Q14520 560 aaPredicted RBP10.73□□□□□ -0.69
MSH6-208ENST00000493177 TATDN3Q17R31 274 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 ZNF585BQ52M93 769 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 LIN54Q6MZP7 749 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 LIAT1Q6ZQX7 453 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 THNSL2Q86YJ6 484 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 LGI3Q8N145 548 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 UXS1Q8NBZ7 420 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 OR4C13Q8NGP0 309 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 RNASE11Q8TAA1 199 aaKnown RBP10.73□□□□□ -0.69
MSH6-208ENST00000493177 ZNF431Q8TF32 576 aaPredicted RBP10.73□□□□□ -0.69
MSH6-208ENST00000493177 GLYATL2Q8WU03 294 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 EAF1Q96JC9 268 aaPredicted RBP10.73□□□□□ -0.69
MSH6-208ENST00000493177 HARBI1Q96MB7 349 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 TMEM222Q9H0R3 208 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 MMP24Q9Y5R2 645 aa10.73□□□□□ -0.69
MSH6-208ENST00000493177 FAM90A9PA6NNJ1 464 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 CREBL2O60519 120 aaPredicted RBP10.72□□□□□ -0.69
MSH6-208ENST00000493177 ATG12O94817 140 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 HRASP01112 189 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 RPA2P15927 270 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 RELBQ01201 579 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 AANATQ16613 207 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 ANKRD55Q3KP44 614 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 TMEM177Q53S58 311 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 TMEM268Q5VZI3 342 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 SSX9Q7RTT3 188 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 SELENOHQ8IZQ5 122 aaKnown RBP10.72□□□□□ -0.69
MSH6-208ENST00000493177 DMBX1Q8NFW5 382 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 OSR1Q8TAX0 266 aaPredicted RBP10.72□□□□□ -0.69
MSH6-208ENST00000493177 R3HDM4Q96D70 268 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 RITA1Q96K30 269 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 TSNAXQ99598 290 aaKnown RBP10.72□□□□□ -0.69
MSH6-208ENST00000493177 PHB2Q99623 299 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 PLEKHA2Q9HB19 425 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 FAM212BQ9NTI7 297 aaPredicted RBP10.72□□□□□ -0.69
MSH6-208ENST00000493177 ALG5Q9Y673 324 aa10.72□□□□□ -0.69
MSH6-208ENST00000493177 NCBP2LA6PVI3 153 aaKnown RBP10.71□□□□□ -0.69
MSH6-208ENST00000493177 SSNA1O43805 119 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 DUS4LO95620 317 aaKnown RBP10.71□□□□□ -0.69
MSH6-208ENST00000493177 CDS2O95674 445 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 KRASP01116 189 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 NQO2P16083 231 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 G6PCP35575 357 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 AKR1C2P52895 323 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 PLGLAQ15195 96 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 MMDQ15546 238 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 VMA21Q3ZAQ7 101 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 TMEM219Q86XT9 240 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 VKORC1L1Q8N0U8 176 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 C12orf45Q8N5I9 185 aaPredicted RBP10.71□□□□□ -0.69
MSH6-208ENST00000493177 LHFPL5Q8TAF8 219 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 PIFOQ8TCI5 191 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 RBPMSQ93062 196 aaKnown RBP10.71□□□□□ -0.69
MSH6-208ENST00000493177 AIFM2Q9BRQ8 373 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 RAB18Q9NP72 206 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 COMMD9Q9P000 198 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 KIAA1456Q9P272 454 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 PITPNC1Q9UKF7 332 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 TCF19Q9Y242 345 aa10.71□□□□□ -0.69
MSH6-208ENST00000493177 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 PIGBOS1A0A0B4J2F0 54 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 SNRPGP15A8MWD9 76 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 IGKV1-39P01597 117 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 IGKV1D-39P04432 117 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 HOXB5P09067 269 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 CNTFRP26992 372 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 LGALS7P47929 136 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 EBI3Q14213 229 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 FBLN7Q53RD9 439 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 ARSJQ5FYB0 599 aaPredicted RBP10.7□□□□□ -0.7
MSH6-208ENST00000493177 Q6ZSV7 163 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 LINC01006Q8NI28 216 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 MITD1Q8WV92 249 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 WFDC12Q8WWY7 111 aa10.7□□□□□ -0.7
MSH6-208ENST00000493177 IL22RA2Q969J5 263 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms