RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 PJVKQ0ZLH3 352 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 HLA-DRB5Q30154 266 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 CTRB2Q6GPI1 263 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 C1orf229Q6ZS94 237 aaPredicted RBP11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 PNKDQ8N490 385 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 SLC35G3Q8N808 338 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 BEND2Q8NDZ0 799 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 TMEM186Q96B77 213 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 SMIM8Q96KF7 97 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 C18orf12Q96KH6 178 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 TSNAXQ99598 290 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 SIRPDQ9H106 197 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 FAM212BQ9NTI7 297 aaPredicted RBP11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 PRELID3BQ9Y3B1 194 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 OTOGQ6ZRI0 2925 aa11.46□□□□□ -0.57
PDZRN3-210ENST00000492909 DUXBA0A1W2PPF3 345 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 FAM74A7A6NL05 159 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 ZNF705EA8MWA4 302 aaPredicted RBP11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 ADCYAP1P18509 176 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 RPL12P30050 165 aaKnown RBP11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 THBS3P49746 956 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 ARHGDIBP52566 201 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 ZNF137PP52743 207 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 LINC00205P59089 165 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 PRB3Q04118 309 aaPredicted RBP11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 FAM74A3Q4VXF1 159 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 ZNF585BQ52M93 769 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 NCR3LG1Q68D85 454 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 RPL7L1Q6DKI1 246 aaKnown RBP11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 FAM71F2Q6NXP2 309 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 ZNF833PQ6ZTB9 187 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 LYZL2Q7Z4W2 148 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 VMO1Q7Z5L0 202 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 KRTAP1-3Q8IUG1 177 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 FAM219AQ8IW50 185 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 SPAG16Q8N0X2 631 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 SVBPQ8N300 66 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 CD300LFQ8TDQ1 290 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 ADTRPQ96IZ2 230 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 FOXC2Q99958 501 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 CARHSP1Q9Y2V2 147 aaKnown RBP11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 TMED3Q9Y3Q3 217 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 INSIG2Q9Y5U4 225 aa11.46□□□□□ -0.58
PDZRN3-210ENST00000492909 MYO9AB2RTY4 2548 aa11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 A0A096LNT2 108 aa11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 K7EPK0 472 aa11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 TOX4O94842 621 aa11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 OR2B11Q5JQS5 317 aa11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 SELENOHQ8IZQ5 122 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 FAM71E2Q8N5Q1 922 aa11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 CLRN3Q8NCR9 226 aa11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 OR11H6Q8NGC7 330 aa11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 AMMECR1Q9Y4X0 333 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-210ENST00000492909 B4DSR2 109 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 RAMP3O60896 148 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 MSMBP08118 114 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 MMP9P14780 707 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 VDAC1P21796 283 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 KIR2DS2P43631 304 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 LPAR6P43657 344 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 SULT1A2P50226 295 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 AKR1C2P52895 323 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 BRWD1-AS2P59051 145 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 SRSF3P84103 164 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 AKR1C1Q04828 323 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 LOXL1Q08397 574 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 FOXRED2Q8IWF2 684 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 PUSL1Q8N0Z8 303 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 WFDC11Q8NEX6 87 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 OR4P4Q8NGL7 312 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 ST6GALNAC6Q969X2 333 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 PCGF1Q9BSM1 259 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 PLEKHA2Q9HB19 425 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 F8W036 122 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 BUB1B-PAK6H3BSN5 160 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 RBFOX2O43251 390 aaKnown RBP eCLIP11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 FCGR3BO75015 233 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 JTBO76095 146 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 ARG1P05089 322 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 BLOC1S1P78537 153 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 ZNF816Q0VGE8 651 aaPredicted RBP11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 KLRD1Q13241 179 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 ZNF383Q8NA42 475 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 DDB2Q92466 427 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 AIFM2Q9BRQ8 373 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 TREM1Q9NP99 234 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 FBXL17Q9UF56 701 aa11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 LSM5Q9Y4Y9 91 aaKnown RBP11.44□□□□□ -0.58
PDZRN3-210ENST00000492909 E5RGE8 158 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 RNF223E7ERA6 249 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 IGKV1-39P01597 117 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 IGKV1D-39P04432 117 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 CT45A6P0DMU7 189 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 CT45A5P0DMU8 189 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 CT45A7P0DMV0 189 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 HOXB4P17483 251 aaPredicted RBP11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 REG1BP48304 166 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 PAX8Q06710 450 aa11.43□□□□□ -0.58
PDZRN3-210ENST00000492909 GUCA2BQ16661 112 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms