RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 HSPB1P04792 205 aaKnown RBP10.66□□□□□ -0.7
HDAC3-213ENST00000492506 AMY2BP19961 511 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 TAGLN2P37802 199 aaKnown RBP10.66□□□□□ -0.7
HDAC3-213ENST00000492506 CDKN1BP46527 198 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 OR3A1P47881 315 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 GUCA2AQ02747 115 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 ZNF92Q03936 586 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 MALLQ13021 153 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 RPL7L1Q6DKI1 246 aaKnown RBP10.66□□□□□ -0.7
HDAC3-213ENST00000492506 CDPF1Q6NVV7 123 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 DPY19L2P2Q6ZN68 376 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 KCTD9Q7L273 389 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 LYG1Q8N1E2 194 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 SLC26A10Q8NG04 563 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 RGP1Q92546 391 aaPredicted RBP10.66□□□□□ -0.7
HDAC3-213ENST00000492506 AJUBAQ96IF1 538 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 INTS14Q96SY0 518 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 CCL13Q99616 98 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 NIPSNAP3BQ9BS92 247 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 OR5AC2Q9NZP5 309 aa10.66□□□□□ -0.7
HDAC3-213ENST00000492506 ADARB2-AS1A8MUL3 147 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 HSBP1L1C9JCN9 74 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 H3BUX3 64 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 AGPAT2O15120 278 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 TXNDC12O95881 172 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 HBE1P02100 147 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 GRPP07492 148 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 TRGC1P0CF51 173 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 PTHLHP12272 177 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 PCK2Q16822 640 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 SNAI3Q3KNW1 292 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 C2orf76Q3KRA6 126 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 WDR38Q5JTN6 314 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 DPPA3Q6W0C5 159 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 MRPL21Q7Z2W9 205 aaKnown RBP10.65□□□□□ -0.7
HDAC3-213ENST00000492506 WDR86Q86TI4 376 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 HOGA1Q86XE5 327 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 FAM216BQ8N7L0 139 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 ZNF676Q8N7Q3 588 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 OR2D3Q8NGH3 330 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 OR2AE1Q8NHA4 323 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 C8orf46Q8TAG6 207 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 MRGPRDQ8TDS7 321 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 FAM210BQ96KR6 192 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 NMNAT2Q9BZQ4 307 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 HIPK2Q9H2X6 1198 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 KIAA1456Q9P272 454 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 B9D1Q9UPM9 204 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 IER3IP1Q9Y5U9 82 aa10.65□□□□□ -0.7
HDAC3-213ENST00000492506 H0YIZ8 118 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 M0QYG6 137 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 CIDEAO60543 219 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 RPP14O95059 124 aaKnown RBP10.64□□□□□ -0.71
HDAC3-213ENST00000492506 RPL12P30050 165 aaKnown RBP10.64□□□□□ -0.71
HDAC3-213ENST00000492506 P2RY1P47900 373 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 UBE2E1P51965 193 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 IL15RAQ13261 267 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 HCP5Q6MZN7 132 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 OR51D1Q8NGF3 324 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 OR4C13Q8NGP0 309 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 OR1P1Q8NH06 330 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 CASTOR1Q8WTX7 329 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 Q8WTZ3 238 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 AQP3Q92482 292 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 FAM46BQ96A09 425 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 RBMXL1Q96E39 390 aaKnown RBP10.64□□□□□ -0.71
HDAC3-213ENST00000492506 DCTN5Q9BTE1 182 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 RAB22AQ9UL26 194 aa10.64□□□□□ -0.71
HDAC3-213ENST00000492506 OR4C45A6NMZ5 311 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 K7EIL1 84 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 CYB5BO43169 146 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 SNRPCP09234 159 aaKnown RBP10.63□□□□□ -0.71
HDAC3-213ENST00000492506 OTX1P32242 354 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-213ENST00000492506 ZNF616Q08AN1 781 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 LY6EQ16553 131 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 ACOT6Q3I5F7 207 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-213ENST00000492506 NSUN5P1Q3KNT7 163 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 GLYATL3Q5SZD4 288 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 JAGN1Q8N5M9 183 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 SLC35G3Q8N808 338 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 TMEM104Q8NE00 496 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 OR5T1Q8NG75 326 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 OR2T6Q8NHC8 308 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 WIPF2Q8TF74 440 aaPredicted RBP10.63□□□□□ -0.71
HDAC3-213ENST00000492506 CORO2AQ92828 525 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 SRD5A3Q9H8P0 318 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 SRA1Q9HD15 236 aaKnown RBP10.63□□□□□ -0.71
HDAC3-213ENST00000492506 ANAPC10Q9UM13 185 aa10.63□□□□□ -0.71
HDAC3-213ENST00000492506 MSGN1A6NI15 193 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 E5RGE8 158 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 H3BQ15 152 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 K7EP13 123 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 M0R135 149 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 LDLRAD4O15165 306 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 CHST1O43916 411 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 MPIG6BO95866 241 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 IFNA21P01568 189 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 CD28P10747 220 aa10.62□□□□□ -0.71
HDAC3-213ENST00000492506 OR10J1P30954 320 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms