RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 CHCHD2Q9Y6H1 151 aaPredicted RBP1.7□□□□□ -2.14
SNRNP40-207ENST00000491106 SDK2Q58EX2 2172 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 GTF3C1Q12789 2109 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 YLPM1P49750 1951 aaKnown RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TRAV9-1A0A075B6T8 112 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 IGHV1-45A0A0A0MS14 117 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TGIF2-C20orf24A0A0A6YYL0 155 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1-12A0A0C4DH73 117 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 IGHV5-10-1A0A0J9YXX1 117 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 CTXND1A0A1B0GTU2 59 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 hCG_1809904A0A1W2PP81 198 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1W2PPE2 198 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1W2PQM1 296 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1W2PR64 198 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 A0A1W2PRV1 198 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 IGSF23A1L1A6 192 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 C5orf63A6NC05 138 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 OR5B21A6NL26 309 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 A6NLC8 198 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF716A6NP11 495 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ANKRD30BLA7E2S9 258 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 C17orf51A8MQB3 221 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 A8MXE2 369 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 C2CD4DB7Z1M9 353 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 PPP5D1E7EU14 171 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 C17orf112F2Z3M2 114 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 G3V3Y1 287 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 KLRC4-KLRK1H3BQV0 150 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 M0R143 59 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TNFSF11O14788 317 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 HS3ST1O14792 307 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 PHOX2AO14813 284 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 RAB29O14966 203 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SMAD9O15198 467 aaKnown RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC31A2O15432 143 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ADAM20O43506 726 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 PDE6DO43924 150 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 RAMP1O60894 148 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 NDUFS7O75251 213 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 MPDU1O75352 247 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 KLF7O75840 302 aaPredicted RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TRAPPC6AO75865 159 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 CST7O76096 145 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM50AO95807 157 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 IGKV1D-12P01611 117 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 AMBPP02760 352 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TYMSP04818 313 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SOD3P08294 240 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 MMP7P09237 267 aaPredicted RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 CXCL1P09341 107 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 GZMBP10144 247 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 PAX1P15863 534 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SRD5A1P18405 259 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 COX5AP20674 150 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 FGF7P21781 194 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 DDTP30046 118 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 CHRNB4P30926 498 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 OR10J1P30954 320 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 IL2RGP31785 369 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TSPAN7P41732 249 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 CYB561P49447 251 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ASCL1P50553 236 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 LINC01547P58512 204 aaPredicted RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 B3GALT5-AS1P59052 145 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 YPEL3P61236 119 aaPredicted RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 RAB11AP62491 216 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 RANP62826 216 aaKnown RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 GNG3P63215 75 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ARF1P84077 181 aaKnown RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 PMP22Q01453 160 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 RELQ04864 619 aaPredicted RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ZFP36L1Q07352 338 aaKnown RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 RAB31Q13636 194 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC10A1Q14973 349 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF146Q15072 292 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 CEACAM16Q2WEN9 425 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SNAI3Q3KNW1 292 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 KRTAP24-1Q3LI83 254 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 C14orf177Q52M58 125 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM41BQ5BJD5 291 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 DMRTC1Q5HYR2 192 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ACER2Q5QJU3 275 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 C1orf194Q5T5A4 169 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 DCAF12Q5T6F0 453 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 PLCXD3Q63HM9 321 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 CYB5R2Q6BCY4 276 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SLC35E4Q6ICL7 350 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF774Q6NX45 483 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 KCNIP4Q6PIL6 250 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM14EPQ6UXP3 125 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SPNS3Q6ZMD2 512 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 ZNF818PQ6ZRF7 136 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 SHISA6Q6ZSJ9 500 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TIPARPQ7Z3E1 657 aaKnown RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 MRPL52Q86TS9 123 aaKnown RBP1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 MOGAT3Q86VF5 341 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 CALHM1Q8IU99 346 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 TMEM183AQ8IXX5 376 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 Q8IYB0 196 aa1.69□□□□□ -2.14
SNRNP40-207ENST00000491106 C1orf87Q8N0U7 546 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms