RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 TECTAO75443 2155 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 IGKV1-6A0A0C4DH72 117 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 A0A0G2JNJ9 132 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-208ENST00000490993 FAM157CP0CG43 387 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 FHITP49789 147 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 ABHD12Q8N2K0 398 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 SSX3Q99909 188 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 DCTN5Q9BTE1 182 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 THYN1Q9P016 225 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 Q9UFV3 132 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 MSRB2Q9Y3D2 182 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 CFHR2P36980 270 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 ID4P47928 161 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 SELENOTP62341 195 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 IL15RAQ13261 267 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 SNRNP40Q96DI7 357 aaKnown RBP6.13□□□□□ -1.43
NPHP3-208ENST00000490993 COQ2Q96H96 371 aa6.13□□□□□ -1.43
NPHP3-208ENST00000490993 PARD6GQ9BYG4 376 aaPredicted RBP6.13□□□□□ -1.43
NPHP3-208ENST00000490993 FAM74A7A6NL05 159 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 TCF15Q12870 199 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 FAM78BQ5VT40 261 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 WDR86Q86TI4 376 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 TMEM171Q8WVE6 324 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 SSMEM1Q8WWF3 244 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 NEU4Q8WWR8 484 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 MED12Q93074 2177 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 K7ENP7 123 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 CD5P06127 495 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 NPCDR1Q9BY65 106 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 LIME1Q9H400 295 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 RPRMQ9NS64 109 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 ZNF355PQ9NSJ1 428 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 C1RLQ9NZP8 487 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 F2RL2O00254 374 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 F12P00748 615 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 CRYBA1P05813 215 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 WNT2P09544 360 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 ANOS1P23352 680 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 BRS3P32247 399 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 GPR6P46095 362 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 CSN1S1P47710 185 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 GNG4P50150 75 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 OR4A47Q6IF82 309 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 MYPOPQ86VE0 399 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 NECAP1Q8NC96 275 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 OR4P4Q8NGL7 312 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 Q8TCH9 128 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 LEAP2Q969E1 77 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 RARRES2Q99969 163 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 CLEC7AQ9BXN2 247 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 PPIAL4CA0A0B4J2A2 164 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 TMEM250H0YL14 139 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 RAMP3O60896 148 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 PPIAL4GP0DN37 164 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 FAM201AQ5SY85 155 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 ACSM6Q6P461 480 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 RAB24Q969Q5 203 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 RCC1LQ96I51 464 aaKnown RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 ZNF331Q9NQX6 463 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 RPH3ALQ9UNE2 315 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 IGKV1D-17A0A075B6S4 117 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 SAA2-SAA4A0A096LPE2 208 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 TRAV1-1A0A0B4J248 108 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 A0A1W2PPQ1 181 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 IGKV1-5P01602 117 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 ARG1P05089 322 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 LIPFP07098 398 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 FBP1P09467 338 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 SAA2P0DJI9 122 aaPredicted RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 RPL27AP46776 148 aaKnown RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 C10orf113Q5VZT2 155 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 PERPQ96FX8 193 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 SLX1AQ9BQ83 275 aa6.12□□□□□ -1.43
NPHP3-208ENST00000490993 PATZ1Q9HBE1 687 aaKnown RBP6.12□□□□□ -1.43
NPHP3-208ENST00000490993 C15orf61A6NNL5 157 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 EGR1P18146 543 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 REG1BP48304 166 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 CLDND2Q8NHS1 167 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 LINC01560Q8TB33 94 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 TUBA4BQ9H853 241 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 CRIM1Q9NZV1 1036 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 ZNF320A2RRD8 509 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 NCBP2LA6PVI3 153 aaKnown RBP6.11□□□□□ -1.43
NPHP3-208ENST00000490993 CGAP01215 116 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 ERVFC1-1P60608 527 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 PSG5Q15238 335 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 COX19Q49B96 90 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 MBD3L1Q8WWY6 194 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 TNFRSF14Q92956 283 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 ZDHHC16Q969W1 377 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 ELOA3CA0A087WX78 387 aaPredicted RBP6.11□□□□□ -1.43
NPHP3-208ENST00000490993 AP4M1O00189 453 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 DVL1O14640 695 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 SRP19P09132 144 aaKnown RBP6.11□□□□□ -1.43
NPHP3-208ENST00000490993 UBE2L3P68036 154 aaKnown RBP6.11□□□□□ -1.43
NPHP3-208ENST00000490993 PQLC2Q6ZP29 291 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 Q6ZR03 302 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 UBTD1Q9HAC8 227 aa6.11□□□□□ -1.43
NPHP3-208ENST00000490993 RPUSD1Q9UJJ7 312 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms