RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 METTL1Q9UBP6 276 aaKnown RBP12.55□□□□□ -0.4
TRA2A-208ENST00000490942 RNF114Q9Y508 228 aa12.55□□□□□ -0.4
TRA2A-208ENST00000490942 H0Y980 276 aa12.54□□□□□ -0.4
TRA2A-208ENST00000490942 NQO2P16083 231 aa12.54□□□□□ -0.4
TRA2A-208ENST00000490942 MDKP21741 143 aaPredicted RBP12.54□□□□□ -0.4
TRA2A-208ENST00000490942 CNTFRP26992 372 aa12.54□□□□□ -0.4
TRA2A-208ENST00000490942 RBMS2Q15434 407 aaKnown RBP12.54□□□□□ -0.4
TRA2A-208ENST00000490942 SLC35E3Q7Z769 313 aa12.54□□□□□ -0.4
TRA2A-208ENST00000490942 PPP1R27Q86WC6 154 aa12.54□□□□□ -0.4
TRA2A-208ENST00000490942 SPATA3Q8NHX4 192 aa12.54□□□□□ -0.4
TRA2A-208ENST00000490942 RTBDNQ9BSG5 229 aaPredicted RBP12.54□□□□□ -0.4
TRA2A-208ENST00000490942 GON7Q9BXV9 100 aa12.54□□□□□ -0.4
TRA2A-208ENST00000490942 SIGLEC9Q9Y336 463 aa12.54□□□□□ -0.4
TRA2A-208ENST00000490942 SRRM4A7MD48 611 aaKnown RBP12.53□□□□□ -0.4
TRA2A-208ENST00000490942 AP4M1O00189 453 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 SLC25A17O43808 307 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 RAMP3O60896 148 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 IGF1P05019 195 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 VSIG10L2P0DP72 767 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
TRA2A-208ENST00000490942 PLGLAQ15195 96 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 ZNF562Q6V9R5 426 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 Q6ZS46 218 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 OR4A5Q8NH83 315 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 RHOVQ96L33 236 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 GPHA2Q96T91 129 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 FBXL15Q9H469 300 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 BET1LQ9NYM9 111 aa12.53□□□□□ -0.4
TRA2A-208ENST00000490942 PIGBOS1A0A0B4J2F0 54 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 UPK1BO75841 260 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 ZNF585BQ52M93 769 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.41
TRA2A-208ENST00000490942 OR2B11Q5JQS5 317 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 C12orf54Q6X4T0 127 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 PUSL1Q8N0Z8 303 aaKnown RBP12.52□□□□□ -0.41
TRA2A-208ENST00000490942 CHPT1Q8WUD6 406 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 GALNT14Q96FL9 552 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 ZNF747Q9BV97 191 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 OR51J1Q9H342 316 aa12.52□□□□□ -0.41
TRA2A-208ENST00000490942 FBN1P35555 2871 aaKnown RBP12.52□□□□□ -0.41
TRA2A-208ENST00000490942 IGHV7-81A0A0B4J1V7 117 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 C3orf85A0A1B0GTC6 90 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 CRYM-AS1A6NIL9 109 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 PLA2G10O15496 165 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 LYRM1O43325 122 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 PEX14O75381 377 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 ATG12O94817 140 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 OR2A4O95047 310 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 NDUFB6O95139 128 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 SAA1P0DJI8 122 aaPredicted RBP12.51□□□□□ -0.41
TRA2A-208ENST00000490942 PI3P19957 117 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 UCP1P25874 307 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 CRIP2P52943 208 aaPredicted RBP12.51□□□□□ -0.41
TRA2A-208ENST00000490942 UBE2MP61081 183 aaKnown RBP12.51□□□□□ -0.41
TRA2A-208ENST00000490942 C9orf152Q5JTZ5 239 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 MMD2Q8IY49 270 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM167AQ8TBQ9 72 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 WIPF2Q8TF74 440 aaPredicted RBP12.51□□□□□ -0.41
TRA2A-208ENST00000490942 WFDC12Q8WWY7 111 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 OR2A7Q96R45 310 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 NAA60Q9H7X0 242 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 VSIG4Q9Y279 399 aa12.51□□□□□ -0.41
TRA2A-208ENST00000490942 SERPINE2P07093 398 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 IL6RP08887 468 aaPredicted RBP12.5□□□□□ -0.41
TRA2A-208ENST00000490942 MAS1LP35410 378 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 LPAR6P43657 344 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 ERVK-16P61578 105 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 CX3CL1P78423 397 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 DHODHQ02127 395 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 ASAH1Q13510 395 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 PRSS8Q16651 343 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM128Q5BJH2 165 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 SGPP2Q8IWX5 399 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 COMMD1Q8N668 190 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 TAF15Q92804 592 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRA2A-208ENST00000490942 RBMXL1Q96E39 390 aaKnown RBP12.5□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM68Q96MH6 324 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 HSPB9Q9BQS6 159 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 KCNIP3Q9Y2W7 256 aa12.5□□□□□ -0.41
TRA2A-208ENST00000490942 TEX13DA0A0J9YY54 714 aaPredicted RBP12.49□□□□□ -0.41
TRA2A-208ENST00000490942 SH2D7A6NKC9 451 aaPredicted RBP12.49□□□□□ -0.41
TRA2A-208ENST00000490942 MARCH11A6NNE9 402 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 KBTBD11O94819 623 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 S1PR2O95136 353 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 CA2P00918 260 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 SLC6A1P30531 599 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 BTCP35070 178 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 OR4A47Q6IF82 309 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 STPG2Q8N412 459 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 KLHDC1Q8N7A1 406 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 R3HDM4Q96D70 268 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM222Q9H0R3 208 aa12.49□□□□□ -0.41
TRA2A-208ENST00000490942 FCN1O00602 326 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 ACTL6BO94805 426 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 CDS2O95674 445 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 ANXA3P12429 323 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 SLC35B1P78383 322 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 SRPXP78539 464 aa12.48□□□□□ -0.41
TRA2A-208ENST00000490942 TMEM267Q0VDI3 215 aaPredicted RBP12.48□□□□□ -0.41
TRA2A-208ENST00000490942 MRGPRG-AS1Q2M3A8 158 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms