RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 RAB3CQ96E17 227 aa11.69□□□□□ -0.54
COL2A1-207ENST00000490609 ZC4H2Q9NQZ6 224 aa11.69□□□□□ -0.54
COL2A1-207ENST00000490609 C2orf70A6NJV1 201 aa11.68□□□□□ -0.54
COL2A1-207ENST00000490609 ARL6IP5O75915 188 aa11.68□□□□□ -0.54
COL2A1-207ENST00000490609 IL6RP08887 468 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-207ENST00000490609 SAA1P0DJI8 122 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-207ENST00000490609 RRASP10301 218 aa11.68□□□□□ -0.54
COL2A1-207ENST00000490609 KIR2DS2P43631 304 aa11.68□□□□□ -0.54
COL2A1-207ENST00000490609 MLLT11Q13015 90 aaPredicted RBP11.68□□□□□ -0.54
COL2A1-207ENST00000490609 RTL8BQ17RB0 113 aa11.68□□□□□ -0.54
COL2A1-207ENST00000490609 PHB2Q99623 299 aa11.68□□□□□ -0.54
COL2A1-207ENST00000490609 HECTD4Q9Y4D8 3996 aa11.68□□□□□ -0.54
COL2A1-207ENST00000490609 DNAH6Q9C0G6 4158 aa11.68□□□□□ -0.54
COL2A1-207ENST00000490609 HMX3A6NHT5 357 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 AIREO43918 545 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 HIST1H1DP16402 221 aaKnown RBP11.67□□□□□ -0.54
COL2A1-207ENST00000490609 ATP5G2Q06055 141 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 TRAM1Q15629 374 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 TATDN3Q17R31 274 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 KLK9Q2XQG4 91 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 VMA21Q3ZAQ7 101 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 VKORC1L1Q8N0U8 176 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 OSR1Q8TAX0 266 aaPredicted RBP11.67□□□□□ -0.54
COL2A1-207ENST00000490609 WDR89Q96FK6 387 aaPredicted RBP11.67□□□□□ -0.54
COL2A1-207ENST00000490609 FANCD2OSQ96PS1 177 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 MGLLQ99685 303 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 HERC2O95714 4834 aa11.67□□□□□ -0.54
COL2A1-207ENST00000490609 A0A075B6Q4 140 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 IGKV1D-13A0A0B4J2D9 117 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 OR2J3O76001 311 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 OR2C1O95371 312 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 IGKV1-13P0DP09 117 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 FOLR2P14207 255 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 CRHBPP24387 322 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 AQP4P55087 323 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 CDK10Q15131 360 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 C15orf32Q32M92 178 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 LAX1Q8IWV1 398 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 NECAP1Q8NC96 275 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 CACNG8Q8WXS5 425 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 ACOT12Q8WYK0 555 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 ADTRPQ96IZ2 230 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 SRD5A3Q9H8P0 318 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 SCN3BQ9NY72 215 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 PEMTQ9UBM1 199 aa11.66□□□□□ -0.54
COL2A1-207ENST00000490609 TRAV1-2A0A0B4J238 106 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 CGB1A6NKQ9 187 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 IFITM5A6NNB3 132 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 OR11H12B2RN74 326 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 J3QRK9 145 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 LGALS9O00182 355 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 RGS10O43665 173 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 NDUFB8O95169 186 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 HLA-DQB1P01920 261 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 PSMA1P25786 263 aaKnown RBP11.65□□□□□ -0.54
COL2A1-207ENST00000490609 ACOT13Q9NPJ3 140 aa11.65□□□□□ -0.54
COL2A1-207ENST00000490609 ANKRD65E5RJM6 399 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 FCGR3BO75015 233 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 TPPPO94811 219 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 IGHV3-23P01764 117 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 MYOD1P15172 320 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 RAB6AP20340 208 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 EWSR1Q01844 656 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL2A1-207ENST00000490609 PRSS48Q7RTY5 328 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 GPHB5Q86YW7 130 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 PUSL1Q8N0Z8 303 aaKnown RBP11.64□□□□□ -0.55
COL2A1-207ENST00000490609 ZNF645Q8N7E2 425 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 KCTD12Q96CX2 325 aaKnown RBP11.64□□□□□ -0.55
COL2A1-207ENST00000490609 GPHA2Q96T91 129 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 GINS4Q9BRT9 223 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 MLXQ9UH92 298 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 TPRKBQ9Y3C4 175 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 S4R3C0 116 aa11.64□□□□□ -0.55
COL2A1-207ENST00000490609 TMEM213A2RRL7 107 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 CRYGCP07315 174 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 ZNF735P0CB33 412 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 AREGP15514 252 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 CBLN1P23435 193 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 NFYAP23511 347 aaPredicted RBP11.63□□□□□ -0.55
COL2A1-207ENST00000490609 PSMD7P51665 324 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 CBX3Q13185 183 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 OR2B11Q5JQS5 317 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 MMD2Q8IY49 270 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 TMEM61Q8N0U2 210 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 SPIN2AQ99865 258 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 SPIN2BQ9BPZ2 258 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 OVOL2Q9BRP0 275 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 KRTAP17-1Q9BYP8 105 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 OR51E2Q9H255 320 aa11.63□□□□□ -0.55
COL2A1-207ENST00000490609 RBMX2Q9Y388 322 aaKnown RBP11.63□□□□□ -0.55
COL2A1-207ENST00000490609 RBM7Q9Y580 266 aaKnown RBP11.63□□□□□ -0.55
COL2A1-207ENST00000490609 NPIPB5A8MRT5 1133 aa11.62□□□□□ -0.55
COL2A1-207ENST00000490609 MPPED1O15442 326 aa11.62□□□□□ -0.55
COL2A1-207ENST00000490609 SSX5O60225 188 aa11.62□□□□□ -0.55
COL2A1-207ENST00000490609 GGCTO75223 188 aaKnown RBP11.62□□□□□ -0.55
COL2A1-207ENST00000490609 CDNFQ49AH0 187 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms