RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CPMP14384 443 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 GZMHP20718 246 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 OPRK1P41145 380 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 RPS20P60866 119 aaKnown RBP2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 NCALDP61601 193 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 GNA12Q03113 381 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 CAV1Q03135 178 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 LINC00303Q3SY05 128 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 MRPL2Q5T653 305 aaKnown RBP2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 C9orf64Q5T6V5 341 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 MARCH3Q86UD3 253 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 OSR2Q8N2R0 312 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 ST6GALNAC3Q8NDV1 305 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 OR5J2Q8NH18 312 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 MBD3L1Q8WWY6 194 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 KLK6Q92876 244 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 GPR146Q96CH1 333 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 MS4A6EQ96DS6 147 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 REEP6Q96HR9 211 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 PYURFQ96I23 114 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 DERL3Q96Q80 235 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 THTPAQ9BU02 230 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 CXorf21Q9HAI6 301 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 KCNIP2Q9NS61 270 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 CA10Q9NS85 328 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 DNMT1P26358 1616 aaKnown RBP2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 PTPRTO14522 1441 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 NOS1P29475 1434 aa2.66□□□□□ -1.98
HMGB1P38-201ENST00000490557 NID2Q14112 1375 aa2.65□□□□□ -1.98
HMGB1P38-201ENST00000490557 IGHV1-45A0A0A0MS14 117 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGHV3-72A0A0B4J1Y9 119 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 RPL36A-HNRNPH2H7BZ11 118 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 M0R381 172 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 POP7O75817 140 aaKnown RBP2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 HLA-DQA1P01909 254 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 APOA2P02652 100 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 C8GP07360 202 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF806P0C7X5 589 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 CDK2P24941 298 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 AKR1C3P42330 323 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 GRK1Q15835 563 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 C12orf74Q32Q52 190 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 PLPPR5Q32ZL2 321 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 DNLZQ5SXM8 178 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 IBA57Q5T440 356 aaKnown RBP2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 HES3Q5TGS1 186 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 BAP18Q8IXM2 172 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 ORMDL3Q8N138 153 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 TMEM256Q8N2U0 113 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR4K5Q8NGD3 323 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 OR8A1Q8NGG7 326 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 CD200R1Q8TD46 325 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 C2orf15Q8WU43 125 aaKnown RBP2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 TSPAN32Q96QS1 320 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 TRIB3Q96RU7 358 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 NMNAT3Q96T66 252 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 RNF5Q99942 180 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 CCDC32Q9BV29 185 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 TMEM222Q9H0R3 208 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 SND1-IT1Q9HBX3 110 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 WFDC1Q9HC57 220 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 SPANXCQ9NY87 97 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 NUBP2Q9Y5Y2 271 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 ATRNO75882 1429 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 MIA2Q96PC5 1412 aa2.65□□□□□ -1.99
HMGB1P38-201ENST00000490557 TONSLQ96HA7 1378 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 IGHV7-4-1A0A0J9YVY3 117 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 C5orf63A6NC05 138 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 BPY2O14599 106 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF207O43670 478 aaKnown RBP2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 GSTZ1O43708 216 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 CST8O60676 142 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 APOMO95445 188 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 PDYNP01213 254 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 LGALS1P09382 135 aaKnown RBP2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 CA7P43166 264 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 EMP1P54849 157 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF816Q0VGE8 651 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 RHEBQ15382 184 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 NDUFA5Q16718 116 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 SMIM21Q3B7S5 101 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 LAIR2Q6ISS4 152 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZFP1Q6P2D0 407 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 LRP11Q86VZ4 500 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 LINC01560Q8TB33 94 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 ZNF675Q8TD23 568 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 MALSU1Q96EH3 234 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 LYSMD1Q96S90 227 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 SERPINI1Q99574 410 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 TBL1YQ9BQ87 522 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 HSPB9Q9BQS6 159 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 C1orf50Q9BV19 199 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 C8orf17Q9NRJ1 99 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 RASL12Q9NYN1 266 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 MED11Q9P086 117 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 JPT1Q9UK76 154 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 SETD5Q9C0A6 1442 aa2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 SETD1AO15047 1707 aaKnown RBP2.64□□□□□ -1.99
HMGB1P38-201ENST00000490557 RFPL4AA6NLU0 287 aa2.63□□□□□ -1.99
HMGB1P38-201ENST00000490557 A8MWL6 223 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms