RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 OSR1Q8TAX0 266 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-214ENST00000490398 GIMAP1Q8WWP7 306 aa14.03□□□□□ -0.16
COL9A3-214ENST00000490398 DCUN1D5Q9BTE7 237 aa14.03□□□□□ -0.16
COL9A3-214ENST00000490398 SLC5A7Q9GZV3 580 aa14.03□□□□□ -0.16
COL9A3-214ENST00000490398 ZNF430Q9H8G1 570 aaPredicted RBP14.03□□□□□ -0.16
COL9A3-214ENST00000490398 K7EIL1 84 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 RAMP3O60896 148 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 RBMXL2O75526 392 aaKnown RBP14.02□□□□□ -0.17
COL9A3-214ENST00000490398 SLC22A5O76082 557 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 EGFEM1PQ0D2K5 195 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 TNXAQ16473 311 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 VMA21Q3ZAQ7 101 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 GPR141Q7Z602 305 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 TMEM17Q86X19 198 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 OR5M8Q8NGP6 311 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 MRAPQ8TCY5 172 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 GPX8Q8TED1 209 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 HSD17B10Q99714 261 aaKnown RBP14.02□□□□□ -0.17
COL9A3-214ENST00000490398 EHFQ9NZC4 300 aa14.02□□□□□ -0.17
COL9A3-214ENST00000490398 IGHV4OR15-8A0A075B7B6 117 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 A0A087WW49 117 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 MSGN1A6NI15 193 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 DUS4LO95620 317 aaKnown RBP14.01□□□□□ -0.17
COL9A3-214ENST00000490398 HLA-DMAP28067 261 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 SLURP1P55000 103 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 TPPP2P59282 170 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 ZNF66Q6ZN08 573 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 ZNF818PQ6ZRF7 136 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 POC5Q8NA72 575 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 ACOT12Q8WYK0 555 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 RHOVQ96L33 236 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 PRELID3BQ9Y3B1 194 aa14.01□□□□□ -0.17
COL9A3-214ENST00000490398 E7EUB6 86 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 SULT1C2O00338 296 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 TRGV3P03979 118 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 LGALS1P09382 135 aaKnown RBP14□□□□□ -0.17
COL9A3-214ENST00000490398 MYOD1P15172 320 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 ZNF182P17025 639 aaPredicted RBP14□□□□□ -0.17
COL9A3-214ENST00000490398 GNRHRP30968 328 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 ZNF616Q08AN1 781 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 DYRK1AQ13627 763 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 RNASE12Q5GAN4 147 aaKnown RBP14□□□□□ -0.17
COL9A3-214ENST00000490398 DHRS11Q6UWP2 260 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 C19orf35Q6ZS72 473 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 SRSF12Q8WXF0 261 aaKnown RBP14□□□□□ -0.17
COL9A3-214ENST00000490398 CMTM3Q96MX0 182 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 ZNF2Q9BSG1 426 aaPredicted RBP14□□□□□ -0.17
COL9A3-214ENST00000490398 FXYD6Q9H0Q3 95 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 MIXL1Q9H2W2 232 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 SCOCQ9UIL1 159 aa14□□□□□ -0.17
COL9A3-214ENST00000490398 HRH1P35367 487 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 MSMO1Q15800 293 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 PYHIN1Q6K0P9 492 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 SSX9Q7RTT3 188 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 REC114Q7Z4M0 266 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 CLVS1Q8IUQ0 354 aaPredicted RBP13.99□□□□□ -0.17
COL9A3-214ENST00000490398 PUSL1Q8N0Z8 303 aaKnown RBP13.99□□□□□ -0.17
COL9A3-214ENST00000490398 OR5H2Q8NGV7 314 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 OR4S2Q8NH73 311 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 DCUN1D4Q92564 292 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 DLX4Q92988 240 aaPredicted RBP13.99□□□□□ -0.17
COL9A3-214ENST00000490398 ZNF355PQ9NSJ1 428 aa13.99□□□□□ -0.17
COL9A3-214ENST00000490398 TNCP24821 2201 aa13.98□□□□□ -0.17
COL9A3-214ENST00000490398 A0A1B0GW64 132 aa13.98□□□□□ -0.17
COL9A3-214ENST00000490398 FAM25AB3EWG3 89 aa13.98□□□□□ -0.17
COL9A3-214ENST00000490398 FAM25CB3EWG5 89 aa13.98□□□□□ -0.17
COL9A3-214ENST00000490398 FAM25GB3EWG6 89 aa13.98□□□□□ -0.17
COL9A3-214ENST00000490398 PRH1P02810 166 aa13.98□□□□□ -0.17
COL9A3-214ENST00000490398 SPAG16Q8N0X2 631 aa13.98□□□□□ -0.17
COL9A3-214ENST00000490398 MOB3AQ96BX8 217 aa13.98□□□□□ -0.17
COL9A3-214ENST00000490398 MCRIP2Q9BUT9 160 aaKnown RBP13.98□□□□□ -0.17
COL9A3-214ENST00000490398 SMIM31A0A1B0GVY4 71 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 HMX3A6NHT5 357 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 SEC14L6B5MCN3 397 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 OR2A4O95047 310 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 HERV-K104P61576 105 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 ZBTB34Q8NCN2 500 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 ADAD2Q8NCV1 583 aaKnown RBP13.97□□□□□ -0.17
COL9A3-214ENST00000490398 OR51H1Q8NH63 302 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 TMEM167AQ8TBQ9 72 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 DPF1Q92782 380 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 OR2A7Q96R45 310 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 ABHD1Q96SE0 405 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 PHB2Q99623 299 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 TINAGL1Q9GZM7 467 aaPredicted RBP13.97□□□□□ -0.17
COL9A3-214ENST00000490398 SLA2Q9H6Q3 261 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 EXTL2Q9UBQ6 330 aa13.97□□□□□ -0.17
COL9A3-214ENST00000490398 TRAV3A0A0B4J244 114 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 TEX22C9J3V5 150 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 LINC01619G3V211 115 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 CTDSP2O14595 271 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 KBTBD11O94819 623 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 IL6RP08887 468 aaPredicted RBP13.96□□□□□ -0.17
COL9A3-214ENST00000490398 OR8U8P0C7N1 319 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 RPA2P15927 270 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 TAS2R46P59540 309 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 ZNF45Q02386 682 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 MZT2AQ6P582 158 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 MMD2Q8IY49 270 aa13.96□□□□□ -0.17
COL9A3-214ENST00000490398 SCPEP1Q9HB40 452 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms