RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 SLC22A6Q4U2R8 563 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 C10orf55Q5SWW7 151 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 CYP2R1Q6VVX0 501 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 FAM220AQ7Z4H9 259 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 CEACAM19Q7Z692 300 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 CSNK1G2-AS1Q8NCQ2 148 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 OR10H4Q8NGA5 316 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 HARBI1Q96MB7 349 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 NICN1Q9BSH3 213 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 TEX12Q9BXU0 123 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 KRTAP1-5Q9BYS1 174 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 C11orf54Q9H0W9 315 aaPredicted RBP5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 MAGIXQ9H6Y5 334 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 SLC35D1Q9NTN3 355 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 STEAP1Q9UHE8 339 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF257Q9Y2Q1 563 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 PEX16Q9Y5Y5 336 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 ETV7Q9Y603 341 aa5.01□□□□□ -1.61
PDLIM1-203ENST00000490391 TEX22C9J3V5 150 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 MRPS14O60783 128 aaKnown RBP5□□□□□ -1.61
PDLIM1-203ENST00000490391 GTF2F2P13984 249 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 FUSP35637 526 aaKnown RBP eCLIP5□□□□□ -1.61
PDLIM1-203ENST00000490391 SOX2P48431 317 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 KRTAP10-1P60331 282 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 IRF3Q14653 427 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 PTGES3Q15185 160 aaKnown RBP5□□□□□ -1.61
PDLIM1-203ENST00000490391 FAM98BQ52LJ0 330 aaKnown RBP5□□□□□ -1.61
PDLIM1-203ENST00000490391 LIPKQ5VXJ0 399 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 IDO2Q6ZQW0 420 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 IL1F10Q8WWZ1 152 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 NSL1Q96IY1 281 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 SPIN2AQ99865 258 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 SPIN2BQ9BPZ2 258 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 ELAC2Q9BQ52 826 aaKnown RBP5□□□□□ -1.61
PDLIM1-203ENST00000490391 JAM3Q9BX67 310 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 DAZ1Q9NQZ3 744 aaKnown RBP5□□□□□ -1.61
PDLIM1-203ENST00000490391 PAK1IP1Q9NWT1 392 aaPredicted RBP5□□□□□ -1.61
PDLIM1-203ENST00000490391 WARS2Q9UGM6 360 aaKnown RBP5□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF221Q9UK13 617 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 TBC1D24Q9ULP9 559 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 LRRC42Q9Y546 428 aa5□□□□□ -1.61
PDLIM1-203ENST00000490391 A0A1B0GW64 132 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 UBE2QL1A1L167 161 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 HMX3A6NHT5 357 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 NPIPB5A8MRT5 1133 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 E7EUB6 86 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF780AO75290 641 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 GLAP06280 429 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 HTR1AP08908 422 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 RPA2P15927 270 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 PRKACGP22612 351 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 NPY1RP25929 384 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 GPR183P32249 361 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 CMC4P56277 68 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 UBE2KP61086 200 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF66Q6ZN08 573 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 GID4Q8IVV7 300 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 TEX45Q8NA69 505 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF502Q8TBZ5 544 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 ACOT12Q8WYK0 555 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 PTX4Q96A99 478 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 EEF1AKMT3Q96AZ1 226 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 C5orf30Q96GV9 206 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 ATP6V1G3Q96LB4 118 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 IL4I1Q96RQ9 567 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 RNF2Q99496 336 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF430Q9H8G1 570 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 TAS2R4Q9NYW5 299 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 H2AFY2Q9P0M6 372 aaPredicted RBP4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 OR1A1Q9P1Q5 309 aa4.99□□□□□ -1.61
PDLIM1-203ENST00000490391 TRBV7-1A0A0A6YYK4 115 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 B2RBV5 119 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 SLC16A6O15403 523 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 BAG2O95816 211 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 CRYGCP07315 174 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 IL6RP08887 468 aaPredicted RBP4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 FUT3P21217 361 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF93P35789 620 aaPredicted RBP4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 TFPI2P48307 235 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 TMEM41BQ5BJD5 291 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 FAM90A2PQ658T7 463 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 LEMD1Q68G75 181 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF880Q6PDB4 577 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 TMEM88Q6PEY1 159 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 SSX9Q7RTT3 188 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 TRPT1Q86TN4 253 aaKnown RBP4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 SLC25A42Q86VD7 318 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF414Q96IQ9 312 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 FYTTD1Q96QD9 318 aaKnown RBP4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 ZNF556Q9HAH1 456 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 AP5S1Q9NUS5 200 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 FGFR1OP2Q9NVK5 253 aa4.98□□□□□ -1.61
PDLIM1-203ENST00000490391 IGLV11-55A0A075B6I3 123 aa4.97□□□□□ -1.61
PDLIM1-203ENST00000490391 IGHV3OR16-8A0A075B7F1 116 aa4.97□□□□□ -1.61
PDLIM1-203ENST00000490391 TRBV5-7A0A0A0MS05 114 aa4.97□□□□□ -1.61
PDLIM1-203ENST00000490391 J3QRE1 110 aa4.97□□□□□ -1.61
PDLIM1-203ENST00000490391 M0R1X1 148 aa4.97□□□□□ -1.61
PDLIM1-203ENST00000490391 DYNC1I1O14576 645 aa4.97□□□□□ -1.61
PDLIM1-203ENST00000490391 RGS13O14921 159 aa4.97□□□□□ -1.61
PDLIM1-203ENST00000490391 NAPSAO96009 420 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms