RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TNXAQ16473 311 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 RTL8BQ17RB0 113 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 KLK9Q2XQG4 91 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 C15orf32Q32M92 178 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 ANKRD55Q3KP44 614 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 VMA21Q3ZAQ7 101 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 ZNF57Q68EA5 555 aaPredicted RBP6.1□□□□□ -1.43
USP39-216ENST00000490193 LRRTM1Q86UE6 522 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 TTC9CQ8N5M4 171 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 OR52B4Q8NGK2 314 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 PHYHIPQ92561 330 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 GGHQ92820 318 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 SPIN2AQ99865 258 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 SPIN2BQ9BPZ2 258 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 SDHAF2Q9NX18 166 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 KLK9Q9UKQ9 250 aa6.1□□□□□ -1.43
USP39-216ENST00000490193 KIR2DL5BA0A0G2JN68 375 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 KIR2DL5BA0A0G2JPC4 375 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 PNMA8CA0A1B0GUJ8 204 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 EFCAB10A6NFE3 127 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 TRDCB7Z8K6 153 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 PPP5D1E7EU14 171 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 UBE2CO00762 179 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 MPPED1O15442 326 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 SOCS1O15524 211 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 SPRY2O43597 315 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 CREBL2O60519 120 aaPredicted RBP6.09□□□□□ -1.43
USP39-216ENST00000490193 OR2C1O95371 312 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 APOC4P55056 127 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 TMEM50BP56557 158 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 TPBGQ13641 420 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 SLC25A42Q86VD7 318 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 IQCF2Q8IXL9 164 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 KIR2DL5AQ8N109 375 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 TMEM217Q8N7C4 229 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 OR4A4PQ8NGN8 299 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 KIR2DL5BQ8NHK3 375 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 OSR1Q8TAX0 266 aaPredicted RBP6.09□□□□□ -1.43
USP39-216ENST00000490193 CACNG8Q8WXS5 425 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 C5orf30Q96GV9 206 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 ADTRPQ96IZ2 230 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 URM1Q9BTM9 101 aaKnown RBP6.09□□□□□ -1.43
USP39-216ENST00000490193 CABLES2Q9BTV7 478 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 OR2D2Q9H210 308 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 KCNK15Q9H427 330 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 MLXQ9UH92 298 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 ZNF257Q9Y2Q1 563 aa6.09□□□□□ -1.43
USP39-216ENST00000490193 TRBV6-7A0A0A0MS04 114 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 NPIPB5A8MRT5 1133 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 OR2J3O76001 311 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 HLA-AP01891 365 aaKnown RBP6.08□□□□□ -1.44
USP39-216ENST00000490193 C8orf88P0DMB2 117 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 DUTP33316 252 aaKnown RBP6.08□□□□□ -1.44
USP39-216ENST00000490193 WNT4P56705 351 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 ST3GAL4Q11206 333 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 CDK10Q15131 360 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 FAM106AQ4KMX7 169 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 ACSM3Q53FZ2 586 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 TM4SF20Q53R12 229 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 OR4A47Q6IF82 309 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 IDO2Q6ZQW0 420 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 CEACAM19Q7Z692 300 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 MMD2Q8IY49 270 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 UXS1Q8NBZ7 420 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 ZNF555Q8NEP9 628 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 OR6M1Q8NGM8 313 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 PHLDA1Q8WV24 401 aaPredicted RBP6.08□□□□□ -1.44
USP39-216ENST00000490193 ACOT12Q8WYK0 555 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 MARC2Q969Z3 335 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 RNF183Q96D59 192 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 CCDC140Q96MF4 163 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 CMSS1Q9BQ75 279 aaKnown RBP6.08□□□□□ -1.44
USP39-216ENST00000490193 MRPL18Q9H0U6 180 aaKnown RBP6.08□□□□□ -1.44
USP39-216ENST00000490193 ZNF430Q9H8G1 570 aaPredicted RBP6.08□□□□□ -1.44
USP39-216ENST00000490193 SMPD3Q9NY59 655 aaPredicted RBP6.08□□□□□ -1.44
USP39-216ENST00000490193 RABL2BQ9UNT1 228 aa6.08□□□□□ -1.44
USP39-216ENST00000490193 PKHD1P08F94 4074 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 LINC00473A8K010 186 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 TEX22C9J3V5 150 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 F8W735 103 aaPredicted RBP6.07□□□□□ -1.44
USP39-216ENST00000490193 FABP7O15540 132 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 ACTL6BO94805 426 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 SCAF4O95104 1147 aaKnown RBP6.07□□□□□ -1.44
USP39-216ENST00000490193 CRYZL1O95825 349 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 CDK1P06493 297 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 SAA1P0DJI8 122 aaPredicted RBP6.07□□□□□ -1.44
USP39-216ENST00000490193 GALP22466 123 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 ARL3P36405 182 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 ELLP55199 621 aaPredicted RBP6.07□□□□□ -1.44
USP39-216ENST00000490193 INSL4Q14641 139 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 DEFB135Q30KP9 77 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 RBM48Q5RL73 367 aaKnown RBP6.07□□□□□ -1.44
USP39-216ENST00000490193 C10orf55Q5SWW7 151 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 BTNL8Q6UX41 500 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 MS4A15Q8N5U1 240 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 SETD9Q8NE22 299 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 OR1L6Q8NGR2 347 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 OR10J5Q8NHC4 309 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 ARHGAP5-AS1Q96IT6 56 aa6.07□□□□□ -1.44
USP39-216ENST00000490193 FANCD2OSQ96PS1 177 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms