RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 ZNF385AQ96PM9 386 aaKnown RBP7.61□□□□□ -1.19
LSAMP-205ENST00000490035 CLEC7AQ9BXN2 247 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 A0A087WWC5 75 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 GLRXP35754 106 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 CEP290O15078 2479 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 SPINT1O43278 529 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 COX6B1P14854 86 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 LGALS3P17931 250 aaKnown RBP7.61□□□□□ -1.19
LSAMP-205ENST00000490035 GUCD1Q96NT3 240 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 FNDC1Q4ZHG4 1894 aaPredicted RBP7.61□□□□□ -1.19
LSAMP-205ENST00000490035 NMUP48645 174 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 TMEM183AQ8IXX5 376 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 CLDND2Q8NHS1 167 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 DLL3Q9NYJ7 618 aa7.61□□□□□ -1.19
LSAMP-205ENST00000490035 DNAL4O96015 105 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 NHLRC3Q5JS37 347 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 MSL2Q9HCI7 577 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 TMEM140Q9NV12 185 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 OR4C46A6NHA9 309 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 IGKV1D-16P01601 117 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 VSIG10L2P0DP72 767 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 NEU4Q8WWR8 484 aaPredicted RBP7.6□□□□□ -1.19
LSAMP-205ENST00000490035 HRKO00198 91 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 CXCL2P19875 107 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 P2RY4P51582 365 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 NUBP1P53384 320 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 GFRA1P56159 465 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 ATP5G2Q06055 141 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 Q6ZT83 130 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 IL36RNQ9UBH0 155 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 DMRT1Q9Y5R6 373 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 PQLC2LA1A4F0 135 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 LMX1BO60663 402 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 FMC1Q96HJ9 113 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 CDX1P47902 265 aaPredicted RBP7.6□□□□□ -1.19
LSAMP-205ENST00000490035 HBBP68871 147 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 FAM131CQ96AQ9 280 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 PLXNA3P51805 1871 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 IGKV1-8A0A0C4DH67 115 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 ZNF25P17030 456 aaPredicted RBP7.6□□□□□ -1.19
LSAMP-205ENST00000490035 PLP1P60201 277 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 SLC16A13Q7RTY0 426 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 HIST1H4GQ99525 98 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 SDK2Q58EX2 2172 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 ADRA2AP08913 450 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 WNT5AP41221 380 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 PDLIM4P50479 330 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 DLX6P56179 175 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 MGAT2Q10469 447 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 C10orf111Q8N326 155 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 HSPB9Q9BQS6 159 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 GPR61Q9BZJ8 451 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 LHFPL6Q9Y693 200 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 SIPA1L1O43166 1804 aa7.6□□□□□ -1.19
LSAMP-205ENST00000490035 ANOS1P23352 680 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 EFNB2P52799 333 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 FHL5Q5TD97 284 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 ZNF71Q9NQZ8 489 aaPredicted RBP7.59□□□□□ -1.19
LSAMP-205ENST00000490035 PILRBQ9UKJ0 227 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 ZNF324O75467 553 aaPredicted RBP7.59□□□□□ -1.19
LSAMP-205ENST00000490035 ARL14EPLP0DKL9 152 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 PAX1P15863 534 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 CRXO43186 299 aaPredicted RBP7.59□□□□□ -1.19
LSAMP-205ENST00000490035 NPPCP23582 126 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 PCGF1Q9BSM1 259 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 FAM90A9PA6NNJ1 464 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 TMEM177Q53S58 311 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 TTC32Q5I0X7 151 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 R4GN57 208 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 NPIPB11E5RHQ5 1161 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 HINT1P49773 126 aaPredicted RBP7.59□□□□□ -1.19
LSAMP-205ENST00000490035 MEF2CQ06413 473 aaPredicted RBP7.59□□□□□ -1.19
LSAMP-205ENST00000490035 IGSF11Q5DX21 431 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 ZAR1Q86SH2 424 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 GTF3AQ92664 365 aaKnown RBP7.59□□□□□ -1.19
LSAMP-205ENST00000490035 SCTP09683 121 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 GEMIN7Q9H840 131 aaKnown RBP7.59□□□□□ -1.19
LSAMP-205ENST00000490035 SPTA1P02549 2419 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 PGPA6NDG6 321 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 TMEM14DPA8MWL7 114 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 AGFG2O95081 481 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 ZNF502Q8TBZ5 544 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 SGK494Q96LW2 274 aa7.59□□□□□ -1.19
LSAMP-205ENST00000490035 CX3CL1P78423 397 aa7.59□□□□□ -1.2
LSAMP-205ENST00000490035 C5orf66Q9H5L9 145 aa7.59□□□□□ -1.2
LSAMP-205ENST00000490035 KLHDC2Q9Y2U9 406 aa7.59□□□□□ -1.2
LSAMP-205ENST00000490035 STPG1Q5TH74 334 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 TUBA4BQ9H853 241 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 PEF1Q9UBV8 284 aaKnown RBP7.58□□□□□ -1.2
LSAMP-205ENST00000490035 GDF9O60383 454 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 ASIPP42127 132 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 WDR90Q96KV7 1748 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 APOBEC3AP31941 199 aaPredicted RBP7.58□□□□□ -1.2
LSAMP-205ENST00000490035 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 FRMPD3Q5JV73 1810 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 KLF14Q8TD94 323 aaPredicted RBP7.58□□□□□ -1.2
LSAMP-205ENST00000490035 ZNF488Q96MN9 340 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 LOC105371242A0A075B767 164 aa7.58□□□□□ -1.2
LSAMP-205ENST00000490035 SRSF7Q16629 238 aaKnown RBP eCLIP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms