RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ECSCRQ19T08 205 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 RNLSQ5VYX0 342 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 OR10K2Q6IF99 312 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 GLDNQ6ZMI3 551 aaPredicted RBP4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 PPP1R27Q86WC6 154 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 LFNGQ8NES3 379 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 CYGBQ8WWM9 190 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 PHYHIPQ92561 330 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 THRSPQ92748 146 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 FAM46BQ96A09 425 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 FLYWCH2Q96CP2 140 aaKnown RBP4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 NEDD4LQ96PU5 975 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 SLA2Q9H6Q3 261 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 RNF150Q9ULK6 438 aa4.84□□□□□ -1.63
PRPF40A-210ENST00000489741 IGKV1-6A0A0C4DH72 117 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 PNMA8CA0A1B0GUJ8 204 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 RPS10-NUDT3A0A1W2PQS6 291 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 H3BUA1 57 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 IGLV2-23P01705 113 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 IGHV3-11P01762 117 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 TFAP2AP05549 437 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 GNAO1P09471 354 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 SRMP19623 302 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 MAPK3P27361 379 aaPredicted RBP4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 CEACAM6P40199 344 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 WNT4P56705 351 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 MRGPRG-AS1Q2M3A8 158 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 ACSM3Q53FZ2 586 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 ACTBL2Q562R1 376 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 GLT8D1Q68CQ7 371 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 UNQ5815/PRO19632Q6UWF5 114 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 DHRSXQ8N5I4 330 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 MS4A15Q8N5U1 240 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 PACRGLQ8N7B6 248 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 ZNF383Q8NA42 475 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 SETD9Q8NE22 299 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 KCNG3Q8TAE7 436 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 IL1F10Q8WWZ1 152 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 ABHD14BQ96IU4 210 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 MS4A10Q96PG2 267 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 OR4C12Q96R67 309 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 GFI1Q99684 422 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 NICN1Q9BSH3 213 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 FAM103A1Q9BTL3 118 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 TMEM59Q9BXS4 323 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 LPAR5Q9H1C0 372 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 RIMS4Q9H426 269 aaPredicted RBP4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 SIGLEC8Q9NYZ4 499 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 ABRACLQ9P1F3 81 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 METTL1Q9UBP6 276 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 HSF4Q9ULV5 492 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 STUB1Q9UNE7 303 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 LSM2Q9Y333 95 aaKnown RBP4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 WASHC3Q9Y3C0 194 aa4.83□□□□□ -1.64
PRPF40A-210ENST00000489741 SOCS1O15524 211 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 TNFRSF6BO95407 300 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 CA2P00918 260 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 SCTP09683 121 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 UCHL1P09936 223 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 ZBTB25P24278 435 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 PITPNAQ00169 270 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 FXYD3Q14802 87 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 HAGHQ16775 308 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 MOGAT2Q3SYC2 334 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 LINC00322Q6ZN03 302 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 MOB1BQ7L9L4 216 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 POC5Q8NA72 575 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 DRAXINQ8NBI3 349 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 ZNF479Q96JC4 524 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 CLCC1Q96S66 551 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 TSNAXQ99598 290 aaKnown RBP4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 HDHD3Q9BSH5 251 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 KCNK15Q9H427 330 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 MAP6D1Q9H9H5 199 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 RANGRFQ9HD47 186 aaPredicted RBP4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 Q9N2K0 584 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 C8orf4Q9NR00 106 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 PLEKHJ1Q9NW61 149 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 OR1A1Q9P1Q5 309 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 AK3Q9UIJ7 227 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 MGAT4AQ9UM21 535 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 A3GALT2U3KPV4 340 aa4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 PLECQ15149 4684 aaKnown RBP4.82□□□□□ -1.64
PRPF40A-210ENST00000489741 A0A0G2JLM5 398 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 SRRM4A7MD48 611 aaKnown RBP4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 H7C2Y5 167 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 SLC17A2O00624 439 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 TRGV3P03979 118 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 CDK1P06493 297 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 CSN3P07498 182 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 ZP3P21754 424 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 CD40LGP29965 261 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 LGALS7P47929 136 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 TPPP2P59282 170 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 HLA-DRB3P79483 266 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 PJVKQ0ZLH3 352 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 IRF3Q14653 427 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 PLGLAQ15195 96 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 ZNF585BQ52M93 769 aa4.81□□□□□ -1.64
PRPF40A-210ENST00000489741 ZFAND6Q6FIF0 208 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms