RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 NPFFO15130 113 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 IGHV1-69P01742 117 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 IGKV1-16P04430 117 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 IL6RP08887 468 aaPredicted RBP11.42□□□□□ -0.58
VPS26A-205ENST00000489656 PET100P0DJ07 73 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 LYL1P12980 280 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 CD1BP29016 333 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 EIF2B2P49770 351 aaKnown RBP11.42□□□□□ -0.58
VPS26A-205ENST00000489656 AARDQ4LEZ3 155 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 Q6ZRM9 215 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 H2BFWTQ7Z2G1 175 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 LHFPL4Q7Z7J7 247 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 OR11H4Q8NGC9 324 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 CFHR4Q92496 578 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 FLYWCH2Q96CP2 140 aaKnown RBP11.42□□□□□ -0.58
VPS26A-205ENST00000489656 AJUBAQ96IF1 538 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 GSKIPQ9P0R6 139 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 CACNG5Q9UF02 275 aa11.42□□□□□ -0.58
VPS26A-205ENST00000489656 ZANQ9Y493 2812 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 H7C2Y5 167 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 ST8SIA3O43173 380 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 SNAPC5O75971 98 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 MBPP02686 304 aaPredicted RBP11.41□□□□□ -0.58
VPS26A-205ENST00000489656 SAA4P35542 130 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 ID3Q02535 119 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 RAB32Q13637 225 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 C11orf87Q6NUJ2 197 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 PRSS54Q6PEW0 395 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 TMEM65Q6PI78 240 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 MOB3BQ86TA1 216 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 PDZD9Q8IXQ8 264 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 DMBX1Q8NFW5 382 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 RHOVQ96L33 236 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 RNF5Q99942 180 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 BET1LQ9NYM9 111 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 POMT1Q9Y6A1 747 aa11.41□□□□□ -0.58
VPS26A-205ENST00000489656 A0A1W2PRD5 423 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 A0A1W2PRF3 423 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 A0A1W2PRM7 423 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 K7EPK0 472 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 TIMM23O14925 209 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 SHOXO15266 292 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 TGFAP01135 160 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 NKX2-1P43699 371 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-205ENST00000489656 LGALS7P47929 136 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 GPR157Q5UAW9 335 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 CYB5R2Q6BCY4 276 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 OR4A47Q6IF82 309 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 FOXRED2Q8IWF2 684 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 PUSL1Q8N0Z8 303 aaKnown RBP11.4□□□□□ -0.58
VPS26A-205ENST00000489656 FAM71E2Q8N5Q1 922 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 MAPK1IP1LQ8NDC0 245 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 OR1S1Q8NH92 325 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 THAP6Q8TBB0 222 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 HARBI1Q96MB7 349 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 RNF126Q9BV68 326 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 MS4A7Q9GZW8 240 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-205ENST00000489656 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.4□□□□□ -0.58
VPS26A-205ENST00000489656 TMEM140Q9NV12 185 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 CACFD1Q9UGQ2 172 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 HILPDAQ9Y5L2 63 aa11.4□□□□□ -0.58
VPS26A-205ENST00000489656 CSPG4Q6UVK1 2322 aa11.4□□□□□ -0.59
VPS26A-205ENST00000489656 CSMD1Q96PZ7 3565 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 TRAV40A0A0B4J280 105 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 SRRM4A7MD48 611 aaKnown RBP11.39□□□□□ -0.59
VPS26A-205ENST00000489656 H0YIZ8 118 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 DEDDO75618 318 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 VENTXO95231 258 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 IGLV2-23P01705 113 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 FGF2P09038 288 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 OR9G9P0C7N8 305 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
VPS26A-205ENST00000489656 BPIFB3P59826 476 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 RELBQ01201 579 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 EBI3Q14213 229 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 SSX2Q16385 188 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 IZUMO4Q1ZYL8 232 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 LRRC37A5PQ49AS3 106 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 ZNF429Q86V71 674 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 TEX15Q9BXT5 2789 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 C11orf1Q9H5F2 150 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 MBD2Q9UBB5 411 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 HSPB7Q9UBY9 170 aa11.39□□□□□ -0.59
VPS26A-205ENST00000489656 ZNF469Q96JG9 3925 aaPredicted RBP11.39□□□□□ -0.59
VPS26A-205ENST00000489656 PLXNB1O43157 2135 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 AVPP01185 164 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 RLN2P04090 185 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-205ENST00000489656 S100A10P60903 97 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 UBE2KP61086 200 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 RPS16P62249 146 aaKnown RBP11.38□□□□□ -0.59
VPS26A-205ENST00000489656 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 PDLIM3Q53GG5 364 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-205ENST00000489656 CXorf66Q5JRM2 361 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-205ENST00000489656 KLF17Q5JT82 389 aaPredicted RBP11.38□□□□□ -0.59
VPS26A-205ENST00000489656 SSX9Q7RTT3 188 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 VKORC1L1Q8N0U8 176 aa11.38□□□□□ -0.59
VPS26A-205ENST00000489656 OR52E5Q8NH55 327 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms