RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZNF429Q86V71 674 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 OSR1Q8TAX0 266 aaPredicted RBP10.78□□□□□ -0.68
VTI1A-206ENST00000489142 SECTM1Q8WVN6 248 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 SRSF12Q8WXF0 261 aaKnown RBP10.78□□□□□ -0.68
VTI1A-206ENST00000489142 SNAPC3Q92966 411 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 ASCL2Q99929 193 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 ADAM30Q9UKF2 790 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 SORL1Q92673 2214 aa10.78□□□□□ -0.68
VTI1A-206ENST00000489142 A0A087WXM4 84 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 TNFAIP8O95379 198 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 TRBV12-3P01733 135 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 SPNP16150 400 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 BRWD1-AS2P59051 145 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 FXYD4P59646 89 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 EIF4EBP1Q13541 118 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-206ENST00000489142 TIMM50Q3ZCQ8 353 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 OVCH2Q7RTZ1 564 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 HOGA1Q86XE5 327 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 OR13F1Q8NGS4 319 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 TINAGL1Q9GZM7 467 aaPredicted RBP10.77□□□□□ -0.69
VTI1A-206ENST00000489142 VCX3AQ9NNX9 186 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 DIABLOQ9NR28 239 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 CCL28Q9NRJ3 127 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 MRPS7Q9Y2R9 242 aaKnown RBP10.77□□□□□ -0.69
VTI1A-206ENST00000489142 PRELID3BQ9Y3B1 194 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 DNAH9Q9NYC9 4486 aa10.77□□□□□ -0.69
VTI1A-206ENST00000489142 H3BUA1 57 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 INSL3P51460 131 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 DYRK1AQ13627 763 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 CDK10Q15131 360 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 UBE2NLQ5JXB2 153 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 ACSM6Q6P461 480 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 C19orf35Q6ZS72 473 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 SSX9Q7RTT3 188 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 MFSD4AQ8N468 514 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 SAMD12Q8N8I0 201 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 ADAD2Q8NCV1 583 aaKnown RBP10.76□□□□□ -0.69
VTI1A-206ENST00000489142 HSD17B10Q99714 261 aaKnown RBP10.76□□□□□ -0.69
VTI1A-206ENST00000489142 RSRP1Q9BUV0 290 aa10.76□□□□□ -0.69
VTI1A-206ENST00000489142 A0A0A6YYH2 397 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 HMX3A6NHT5 357 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 A6NJ64 397 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 SLC22A5O76082 557 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 ACTL6BO94805 426 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 PPYP01298 95 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 OR9G9P0C7N8 305 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 MYOD1P15172 320 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 NCS1P62166 190 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 DCTN2Q13561 401 aaKnown RBP10.75□□□□□ -0.69
VTI1A-206ENST00000489142 TMEM17Q86X19 198 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 OR4S2Q8NH73 311 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 SLC5A7Q9GZV3 580 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 IFT46Q9NQC8 304 aa10.75□□□□□ -0.69
VTI1A-206ENST00000489142 A0A0G2JLM5 398 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 SULT1C2O00338 296 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 XRCC3O43542 346 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 KBTBD11O94819 623 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 SYNJ2BPP57105 145 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 TAS2R20P59543 309 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 RHOGP84095 191 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 ZNF45Q02386 682 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 TMEM69Q5SWH9 247 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 MMD2Q8IY49 270 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 S100A16Q96FQ6 103 aaKnown RBP10.74□□□□□ -0.69
VTI1A-206ENST00000489142 TMEM68Q96MH6 324 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 OR4C12Q96R67 309 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 RANGRFQ9HD47 186 aaPredicted RBP10.74□□□□□ -0.69
VTI1A-206ENST00000489142 AKIP1Q9NQ31 210 aa10.74□□□□□ -0.69
VTI1A-206ENST00000489142 A0A1B0GW64 132 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 E7EUB6 86 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 OR2A4O95047 310 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 PMP2P02689 132 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 EIF4EP06730 217 aaKnown RBP10.73□□□□□ -0.69
VTI1A-206ENST00000489142 GP9P14770 177 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 RFX2P48378 723 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 VBP1P61758 197 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 ZNF66Q6ZN08 573 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 ZNF818PQ6ZRF7 136 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 CROCCP3Q8IVE0 287 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 OR5AP2Q8NGF4 316 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 OR6Q1Q8NGQ2 317 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 OR51H1Q8NH63 302 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 FYTTD1Q96QD9 318 aaKnown RBP10.73□□□□□ -0.69
VTI1A-206ENST00000489142 OR2A7Q96R45 310 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 FUNDC2Q9BWH2 189 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 EHFQ9NZC4 300 aa10.73□□□□□ -0.69
VTI1A-206ENST00000489142 PEF1Q9UBV8 284 aaKnown RBP10.73□□□□□ -0.69
VTI1A-206ENST00000489142 TRIM64CA6NLI5 447 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 CREBL2O60519 120 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-206ENST00000489142 IL6RP08887 468 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-206ENST00000489142 ZP3P21754 424 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 CBX5P45973 191 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 EXOSC2Q13868 293 aaKnown RBP10.72□□□□□ -0.69
VTI1A-206ENST00000489142 KLF5Q13887 457 aaPredicted RBP10.72□□□□□ -0.69
VTI1A-206ENST00000489142 ZNF343Q6P1L6 599 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 SPAG16Q8N0X2 631 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 PUSL1Q8N0Z8 303 aaKnown RBP10.72□□□□□ -0.69
VTI1A-206ENST00000489142 SLC25A46Q96AG3 418 aa10.72□□□□□ -0.69
VTI1A-206ENST00000489142 SPIN2AQ99865 258 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms