RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 BCL3P20749 454 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 CAPZBP47756 277 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 TNXAQ16473 311 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 LPAL2Q16609 132 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 RAET1LQ5VY80 246 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 EBLN2Q6P2I7 272 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 RNASEKQ6P5S7 137 aaKnown RBP13.63□□□□□ -0.23
MCF2L-229ENST00000488765 SLC25A47Q6Q0C1 308 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 GJC3Q8NFK1 279 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 KCNS1Q96KK3 526 aa13.63□□□□□ -0.23
MCF2L-229ENST00000488765 FAM166BA8MTA8 275 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 G6PCP35575 357 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 MORN2Q502X0 79 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 CHRDL1Q9BU40 450 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 SSBP3Q9BWW4 388 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-229ENST00000488765 PHF7Q9BWX1 381 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-229ENST00000488765 C19orf25Q9UFG5 118 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-229ENST00000488765 M0R296 226 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 ZG16O60844 167 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 S1PR2O95136 353 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 ARL14EPLP0DKL9 152 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 SRFP11831 508 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 RBM11P57052 281 aaKnown RBP13.62□□□□□ -0.23
MCF2L-229ENST00000488765 UCN2Q96RP3 112 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 GTSF1LQ9H1H1 148 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 MRPS16Q9Y3D3 137 aaKnown RBP13.62□□□□□ -0.23
MCF2L-229ENST00000488765 CACNA1HO95180 2353 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 CPAMD8Q8IZJ3 1885 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 PPIAL4DF5H284 164 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 HSBP1O75506 76 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 CCL2P13500 99 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 SSTR5P35346 364 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 RPL31P62899 125 aaKnown RBP13.62□□□□□ -0.23
MCF2L-229ENST00000488765 ZNF324BQ6AW86 544 aaPredicted RBP13.62□□□□□ -0.23
MCF2L-229ENST00000488765 NPCDR1Q9BY65 106 aa13.62□□□□□ -0.23
MCF2L-229ENST00000488765 THADAQ6YHU6 1953 aa13.61□□□□□ -0.23
MCF2L-229ENST00000488765 CEP250Q9BV73 2442 aa13.61□□□□□ -0.23
MCF2L-229ENST00000488765 H0Y980 276 aa13.61□□□□□ -0.23
MCF2L-229ENST00000488765 M0R2Z0 102 aa13.61□□□□□ -0.23
MCF2L-229ENST00000488765 SMAGPQ0VAQ4 97 aa13.61□□□□□ -0.23
MCF2L-229ENST00000488765 ZNF808Q8N4W9 903 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-229ENST00000488765 SSBP4Q9BWG4 385 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-229ENST00000488765 ZIC3O60481 467 aa13.61□□□□□ -0.23
MCF2L-229ENST00000488765 MSR1P21757 451 aa13.61□□□□□ -0.23
MCF2L-229ENST00000488765 CD27P26842 260 aa13.61□□□□□ -0.23
MCF2L-229ENST00000488765 DAZAP2Q15038 168 aaPredicted RBP13.61□□□□□ -0.23
MCF2L-229ENST00000488765 RRHO14718 337 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 OR7C2O60412 319 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 RAMP3O60896 148 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 IGHV3-9P01782 118 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 NPY1RP25929 384 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 ARR3P36575 388 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 MUC15Q8N387 334 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 SSMEM1Q8WWF3 244 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 WDR54Q9H977 334 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 IL36BQ9NZH7 164 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 IL36GQ9NZH8 169 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 BDP1A6H8Y1 2624 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 TMEM211Q6ICI0 200 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 LINC00173Q6ZV60 143 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 OR2T6Q8NHC8 308 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 ALKBH4Q9NXW9 302 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 CTXN2P0C2S0 81 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 FBLP22087 321 aaKnown RBP13.6□□□□□ -0.23
MCF2L-229ENST00000488765 S100GP29377 79 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 FGFRL1Q8N441 504 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 KCNE4Q8WWG9 221 aa13.6□□□□□ -0.23
MCF2L-229ENST00000488765 DOCK10Q96BY6 2186 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 GPM6AP51674 278 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 CCR5P51681 352 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 LGALS4P56470 323 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 RPEL1Q2QD12 228 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 SMIM21Q3B7S5 101 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 OR10P1Q8NGE3 313 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 OR1L3Q8NH93 324 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 SMIM12Q96EX1 92 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 OR8B2Q96RD0 313 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 FGF21Q9NSA1 209 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 SVILO95425 2214 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 TRAV9-2A0A087WT02 112 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 BMPR1BO00238 502 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 EPHA8P29322 1005 aaPredicted RBP13.59□□□□□ -0.23
MCF2L-229ENST00000488765 RPL8P62917 257 aaKnown RBP13.59□□□□□ -0.23
MCF2L-229ENST00000488765 OR2M7Q8NG81 312 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 OR1B1Q8NGR6 318 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 OR1F12Q8NHA8 337 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 RAB37Q96AX2 223 aa13.59□□□□□ -0.23
MCF2L-229ENST00000488765 LRP5LA4QPB2 252 aa13.58□□□□□ -0.23
MCF2L-229ENST00000488765 Q0VG73 95 aa13.58□□□□□ -0.23
MCF2L-229ENST00000488765 C9orf135Q5VTT2 229 aa13.58□□□□□ -0.23
MCF2L-229ENST00000488765 PLPPR2Q96GM1 343 aa13.58□□□□□ -0.23
MCF2L-229ENST00000488765 YTHDF2Q9Y5A9 579 aaKnown RBP13.58□□□□□ -0.23
MCF2L-229ENST00000488765 GAGE10A6NGK3 116 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 M0R1X1 148 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 FOXH1O75593 365 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 APOA2P02652 100 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 CFIP05156 583 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 NBEAP1P0C6P0 100 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 B4GALT1P15291 398 aa13.58□□□□□ -0.24
MCF2L-229ENST00000488765 CFHR1Q03591 330 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms