RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 R3HDM4Q96D70 268 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 STARD4Q96DR4 205 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 RHOVQ96L33 236 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 PARLQ9H300 379 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 ASCL3Q9NQ33 180 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
CLIC4-202ENST00000488683 TPRP12270 2363 aaKnown RBP10.52□□□□□ -0.73
CLIC4-202ENST00000488683 CXorf65A6NEN9 183 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 CLDN14O95500 239 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 IGLV1-44P01699 117 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 ATP5G3P48201 142 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 MEF2BQ02080 365 aaPredicted RBP10.51□□□□□ -0.73
CLIC4-202ENST00000488683 MSMO1Q15800 293 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 SSMEM1Q8WWF3 244 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 PINX1Q96BK5 328 aaKnown RBP10.51□□□□□ -0.73
CLIC4-202ENST00000488683 NBASA2RRP1 2371 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 ZFHX3Q15911 3703 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 S100PP25815 95 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 CHRNA7P36544 502 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 GPR12P47775 334 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 GNG10P50151 68 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 SMIM21Q3B7S5 101 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 IGFL2Q6UWQ7 119 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 CENPVQ7Z7K6 275 aaPredicted RBP10.51□□□□□ -0.73
CLIC4-202ENST00000488683 OR2V2Q96R30 315 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 HINT2Q9BX68 163 aa10.51□□□□□ -0.73
CLIC4-202ENST00000488683 RAI1Q7Z5J4 1906 aaPredicted RBP10.51□□□□□ -0.73
CLIC4-202ENST00000488683 A0A1W2PPQ1 181 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 C15orf62A8K5M9 175 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 PRR33A8MZF0 331 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 IFNA10P01566 189 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
CLIC4-202ENST00000488683 FAM3BP58499 235 aaPredicted RBP10.5□□□□□ -0.73
CLIC4-202ENST00000488683 P2RY6Q15077 328 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 ZNF718Q3SXZ3 478 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 ASPHD1Q5U4P2 390 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 UNQ6494/PRO21346Q6UXR6 183 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 GCSAMQ8N6F7 178 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 C1orf162Q8NEQ5 155 aaPredicted RBP10.5□□□□□ -0.73
CLIC4-202ENST00000488683 S100PBPQ96BU1 408 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 PCGF1Q9BSM1 259 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 TMEM147Q9BVK8 224 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 PRO1933Q9H354 126 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 ZNF71Q9NQZ8 489 aaPredicted RBP10.5□□□□□ -0.73
CLIC4-202ENST00000488683 PLSCR4Q9NRQ2 329 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 COL12A1Q99715 3063 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 A0A0U1RQK1 487 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 A0A1B0GUS0 222 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 CYB5R3P00387 301 aaPredicted RBP10.5□□□□□ -0.73
CLIC4-202ENST00000488683 RPL23P62829 140 aaKnown RBP10.5□□□□□ -0.73
CLIC4-202ENST00000488683 NKX6-1P78426 367 aaPredicted RBP10.5□□□□□ -0.73
CLIC4-202ENST00000488683 CST9LP1Q5W188 147 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 PIP4P1Q86T03 277 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 ZNF114Q8NC26 417 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 P2RX4Q99571 388 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 SH3BGRL2Q9UJC5 107 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 LAMP3Q9UQV4 416 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 TIMM9Q9Y5J7 89 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 TANC2Q9HCD6 1990 aa10.5□□□□□ -0.73
CLIC4-202ENST00000488683 CLDN34H7C241 214 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 RAB29O14966 203 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 CGAP01215 116 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 CDX1P47902 265 aaPredicted RBP10.49□□□□□ -0.73
CLIC4-202ENST00000488683 PRAMEF5Q5TYX0 476 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 MOB3BQ86TA1 216 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 Q8N7P7 452 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 SARAFQ96BY9 339 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 LURAP1Q96LR2 239 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 DSCAML1Q8TD84 2053 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 TRAV17A0A0B4J275 112 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 B4DEV8 164 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 MMP23AO75900 390 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 DUTP33316 252 aaKnown RBP10.49□□□□□ -0.73
CLIC4-202ENST00000488683 RND2P52198 227 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 PNRC1Q12796 327 aaPredicted RBP10.49□□□□□ -0.73
CLIC4-202ENST00000488683 MBNL2Q5VZF2 373 aaKnown RBP10.49□□□□□ -0.73
CLIC4-202ENST00000488683 MIC13Q5XKP0 118 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 C1orf87Q8N0U7 546 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 ITLN1Q8WWA0 313 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 MRPL37Q9BZE1 423 aaKnown RBP10.49□□□□□ -0.73
CLIC4-202ENST00000488683 GAR1Q9NY12 217 aaKnown RBP10.49□□□□□ -0.73
CLIC4-202ENST00000488683 SPATA31B1PQ5VZV4 182 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 BHLHA15Q7RTS1 189 aaPredicted RBP10.49□□□□□ -0.73
CLIC4-202ENST00000488683 HIST3H2BBQ8N257 126 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 TMEM170AQ8WVE7 144 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 OR6C3Q9NZP0 311 aa10.49□□□□□ -0.73
CLIC4-202ENST00000488683 APC2O95996 2303 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 IGHV2-70P01814 119 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 SNRPCP09234 159 aaKnown RBP10.48□□□□□ -0.73
CLIC4-202ENST00000488683 S100A2P29034 98 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 TMEM241Q24JQ0 296 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 MORN2Q502X0 79 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 ZNF474Q6S9Z5 364 aaPredicted RBP10.48□□□□□ -0.73
CLIC4-202ENST00000488683 ZNF66Q6ZN08 573 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 OR4X1Q8NH49 305 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 HSD17B10Q99714 261 aaKnown RBP10.48□□□□□ -0.73
CLIC4-202ENST00000488683 OR51M1Q9H341 326 aa10.48□□□□□ -0.73
CLIC4-202ENST00000488683 HEYLQ9NQ87 328 aaPredicted RBP10.48□□□□□ -0.73
CLIC4-202ENST00000488683 ZMAT5Q9UDW3 170 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms