RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 HADHQ16836 314 aaKnown RBP1.98□□□□□ -2.09
ITGB1-214ENST00000488427 ACSBG2Q5FVE4 666 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 AGTRAPQ6RW13 159 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 MARCH3Q86UD3 253 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 CBLN2Q8IUK8 224 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 CDH26Q8IXH8 852 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 PIGXQ8TBF5 258 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 DCAKDQ8WVC6 231 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 C10orf82Q8WW14 230 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 C11orf40Q8WZ69 217 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 CDS1Q92903 461 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 ZHX1-C8orf76Q96EF9 292 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 SNF8Q96H20 258 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 TBL1XR1Q9BZK7 514 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 MS4A12Q9NXJ0 267 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 HEY1Q9Y5J3 304 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 KPTNQ9Y664 436 aa1.98□□□□□ -2.09
ITGB1-214ENST00000488427 DSCAML1Q8TD84 2053 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 KBTBD11-OT1A0A1B0GTJ5 212 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 ZNF878C9JN71 531 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 PDYNP01213 254 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 PRPS1L1P21108 318 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 PAX6P26367 422 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 SSR2P43308 183 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 TTPAP49638 278 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 AP1S2P56377 157 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 TNFAIP6P98066 277 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-214ENST00000488427 PRB3Q04118 309 aaPredicted RBP1.97□□□□□ -2.09
ITGB1-214ENST00000488427 MERTKQ12866 999 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 TFDP2Q14188 446 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 ZNF404Q494X3 552 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 SPRNQ5BIV9 151 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 TMEM136Q6ZRR5 245 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 PID1Q7Z2X4 250 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 LRRC6Q86X45 466 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 OR52N1Q8NH53 320 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 CMTM2Q8TAZ6 248 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 GHSRQ92847 366 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 SLC19A3Q9BZV2 496 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 OR51B6Q9H340 312 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 PARVAQ9NVD7 372 aa1.97□□□□□ -2.09
ITGB1-214ENST00000488427 E5RI56 91 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 CCRL2O00421 344 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 OVOL1O14753 267 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 SERPINB7O75635 380 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 PTHP01270 115 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 IFNA10P01566 189 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 LGALS3P17931 250 aaKnown RBP1.96□□□□□ -2.1
ITGB1-214ENST00000488427 PRKACBP22694 351 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 RPS3P23396 243 aaKnown RBP eCLIP1.96□□□□□ -2.1
ITGB1-214ENST00000488427 STOMP27105 288 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 ERVS71-1P61550 626 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 POU6F1Q14863 301 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 KRTAP20-1Q3LI63 56 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 FAM173BQ6P4H8 233 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 LINC00322Q6ZN03 302 aaPredicted RBP1.96□□□□□ -2.1
ITGB1-214ENST00000488427 TMPPEQ6ZT21 453 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 ZNF767PQ75MW2 155 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 UBE2DNLQ8IWF7 75 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 PQLC3Q8N755 202 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 C15orf53Q8NAA6 179 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 OR52R1Q8NGF1 315 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 RPS4Y2Q8TD47 263 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 TMEM106AQ96A25 262 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 LRRC45Q96CN5 670 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 KCNS1Q96KK3 526 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 OR4K3Q96R72 315 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 PDCD1LG2Q9BQ51 273 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 ALX4Q9H161 411 aaPredicted RBP1.96□□□□□ -2.1
ITGB1-214ENST00000488427 NMRK1Q9NWW6 199 aa1.96□□□□□ -2.1
ITGB1-214ENST00000488427 HMCN1Q96RW7 5635 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 ANKRD65E5RJM6 399 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 GABRPO00591 440 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 NME4O00746 187 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 RAB36O95755 333 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 HLA-HP01893 362 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 PGA5P0DJD9 388 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 MPC1LP0DKB6 136 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 CD79AP11912 226 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 GFAPP14136 432 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 CPMP14384 443 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 GGT2P36268 569 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 POLR2IP36954 125 aaKnown RBP1.95□□□□□ -2.1
ITGB1-214ENST00000488427 XKP51811 444 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 NDUFA8P51970 172 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 HAMPP81172 84 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 PMS2P3Q13401 168 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 PDK2Q15119 407 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 RCN1Q15293 331 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 MAPRE2Q15555 327 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 STUMQ69YW2 141 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 HCP5Q6MZN7 132 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 C3orf33Q6P1S2 294 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 WDR82Q6UXN9 313 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 EIF3MQ7L2H7 374 aaKnown RBP1.95□□□□□ -2.1
ITGB1-214ENST00000488427 AAED1Q7RTV5 226 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 VKORC1L1Q8N0U8 176 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 ORMDL3Q8N138 153 aa1.95□□□□□ -2.1
ITGB1-214ENST00000488427 ZNF567Q8N184 647 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms