RNA–Protein interactions for RNA: ENST00000488376.2

SYNE1-226, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 414 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-226ENST00000488376 OSR1Q8TAX0 266 aaPredicted RBP10.77□□□□□ -0.69
SYNE1-226ENST00000488376 GPX8Q8TED1 209 aa10.77□□□□□ -0.69
SYNE1-226ENST00000488376 GIMAP1Q8WWP7 306 aa10.77□□□□□ -0.69
SYNE1-226ENST00000488376 HSD17B10Q99714 261 aaKnown RBP10.77□□□□□ -0.69
SYNE1-226ENST00000488376 DCUN1D5Q9BTE7 237 aa10.77□□□□□ -0.69
SYNE1-226ENST00000488376 ZNF430Q9H8G1 570 aaPredicted RBP10.77□□□□□ -0.69
SYNE1-226ENST00000488376 MSGN1A6NI15 193 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 SULT1C2O00338 296 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 SLC22A5O76082 557 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 ZNF182P17025 639 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-226ENST00000488376 HRH1P35367 487 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 TPPP2P59282 170 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 RUNX1Q01196 453 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 TMEM267Q0VDI3 215 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-226ENST00000488376 TNXAQ16473 311 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 CLVS1Q8IUQ0 354 aaPredicted RBP10.76□□□□□ -0.69
SYNE1-226ENST00000488376 TCTEX1D1Q8N7M0 179 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 TEX45Q8NA69 505 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 OR1N2Q8NGR9 330 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 ACOT12Q8WYK0 555 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 FXYD6Q9H0Q3 95 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 MIXL1Q9H2W2 232 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 PRELID3BQ9Y3B1 194 aa10.76□□□□□ -0.69
SYNE1-226ENST00000488376 IGHV4OR15-8A0A075B7B6 117 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 A0A087WW49 117 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 A0A1B0GW64 132 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 WI2-2373I1.2A0A1W2PRP0 233 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 FAM25AB3EWG3 89 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 FAM25CB3EWG5 89 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 FAM25GB3EWG6 89 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 K7EIL1 84 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 TRGV3P03979 118 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 MYOD1P15172 320 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 GNRHRP30968 328 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 SLURP1P55000 103 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 EGFEM1PQ0D2K5 195 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 DYRK1AQ13627 763 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 DHRS11Q6UWP2 260 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 ZNF66Q6ZN08 573 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 C19orf35Q6ZS72 473 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 SSX9Q7RTT3 188 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 OR5M8Q8NGP6 311 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 OR5H2Q8NGV7 314 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 OR4S2Q8NH73 311 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 CMTM3Q96MX0 182 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 ZNF2Q9BSG1 426 aaPredicted RBP10.75□□□□□ -0.69
SYNE1-226ENST00000488376 ZNF355PQ9NSJ1 428 aa10.75□□□□□ -0.69
SYNE1-226ENST00000488376 E7EUB6 86 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 DUS4LO95620 317 aaKnown RBP10.74□□□□□ -0.69
SYNE1-226ENST00000488376 PRH1P02810 166 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 LGALS1P09382 135 aaKnown RBP10.74□□□□□ -0.69
SYNE1-226ENST00000488376 ZNF616Q08AN1 781 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 LAX1Q8IWV1 398 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 PUSL1Q8N0Z8 303 aaKnown RBP10.74□□□□□ -0.69
SYNE1-226ENST00000488376 POC5Q8NA72 575 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 OR51H1Q8NH63 302 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 MRAPQ8TCY5 172 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 SRSF12Q8WXF0 261 aaKnown RBP10.74□□□□□ -0.69
SYNE1-226ENST00000488376 MOB3AQ96BX8 217 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 ABHD1Q96SE0 405 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 EXTL2Q9UBQ6 330 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 DNAH3Q8TD57 4116 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 TGP01266 2768 aa10.74□□□□□ -0.69
SYNE1-226ENST00000488376 SMIM31A0A1B0GVY4 71 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 M0QYG6 137 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 CTDSP2O14595 271 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 KBTBD11O94819 623 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 TAS2R46P59540 309 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 HERV-K104P61576 105 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 MSMO1Q15800 293 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 PYHIN1Q6K0P9 492 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 MZT2AQ6P582 158 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 SPAG16Q8N0X2 631 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 ADAD2Q8NCV1 583 aaKnown RBP10.73□□□□□ -0.69
SYNE1-226ENST00000488376 DCUN1D4Q92564 292 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 DLX4Q92988 240 aaPredicted RBP10.73□□□□□ -0.69
SYNE1-226ENST00000488376 RHOVQ96L33 236 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 PHB2Q99623 299 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 KLK11Q9UBX7 282 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 SCOCQ9UIL1 159 aa10.73□□□□□ -0.69
SYNE1-226ENST00000488376 TRAV3A0A0B4J244 114 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 HMX3A6NHT5 357 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 SEC14L6B5MCN3 397 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 TEX22C9J3V5 150 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 S1PR2O95136 353 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 RLN1P04808 185 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 OR8U8P0C7N1 319 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 RPA2P15927 270 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 ZNF45Q02386 682 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 REC114Q7Z4M0 266 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 OR52I2Q8NH67 350 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 TMEM167AQ8TBQ9 72 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 DYNC2LI1Q8TCX1 351 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 AP3S1Q92572 193 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 MCRIP2Q9BUT9 160 aaKnown RBP10.72□□□□□ -0.69
SYNE1-226ENST00000488376 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 COA4Q9NYJ1 87 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 ADAM30Q9UKF2 790 aa10.72□□□□□ -0.69
SYNE1-226ENST00000488376 ANKRD34BA5PLL1 514 aa10.71□□□□□ -0.69
SYNE1-226ENST00000488376 CGB1A6NKQ9 187 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms