RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 CD302Q8IX05 232 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 DNAJB3Q8WWF6 145 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 IMMP2LQ96T52 175 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 RETNLBQ9BQ08 111 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 DCUN1D5Q9BTE7 237 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 CHMP4BQ9H444 224 aaKnown RBP0.73□□□□□ -2.29
CCDC66-221ENST00000487739 WDR54Q9H977 334 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 SPACA1Q9HBV2 294 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 C8orf4Q9NR00 106 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 CD300AQ9UGN4 299 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 BAZ2BQ9UIF8 2168 aaKnown RBP0.73□□□□□ -2.29
CCDC66-221ENST00000487739 MAST2Q6P0Q8 1798 aa0.73□□□□□ -2.29
CCDC66-221ENST00000487739 C5orf49A4QMS7 147 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 HMSDA8MTL9 139 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 H3BT86 120 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 COX7A2LO14548 114 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 CIAO1O76071 339 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 CRPP02741 224 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 PPBPP02775 128 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 LGALS1P09382 135 aaKnown RBP0.72□□□□□ -2.29
CCDC66-221ENST00000487739 UGT2B7P16662 529 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 PSMB6P28072 239 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 RPL28P46779 137 aaKnown RBP0.72□□□□□ -2.29
CCDC66-221ENST00000487739 FXYD7P58549 80 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 TAS2R20P59543 309 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 TPI1P60174 286 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 UBE2G2P60604 165 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 CXCR4P61073 352 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 HOXC5Q00444 222 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 NNATQ16517 81 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 MIAQ16674 131 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 SDHAF4Q5VUM1 108 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 LYZL1Q6UWQ5 148 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 C7orf65Q6ZTY9 151 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 OR7G1Q8NGA0 311 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 EEF1AKMT1Q8WVE0 214 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 TMA16Q96EY4 203 aaKnown RBP0.72□□□□□ -2.29
CCDC66-221ENST00000487739 ANKRD36BP1Q96IX9 119 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 ZNF514Q96K75 400 aaPredicted RBP0.72□□□□□ -2.29
CCDC66-221ENST00000487739 C7orf50Q9BRJ6 194 aaKnown RBP0.72□□□□□ -2.29
CCDC66-221ENST00000487739 DOHHQ9BU89 302 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 HRASLSQ9HDD0 168 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 CFAP45Q9UL16 551 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 TIMM9Q9Y5J7 89 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 RTTNQ86VV8 2226 aa0.72□□□□□ -2.29
CCDC66-221ENST00000487739 FLT4P35916 1363 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 IGHV1-18A0A0C4DH31 117 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 A0A0J9YW62 118 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 TMEM269A0A1B0GVZ9 245 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 F5H768 121 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 BIRC5O15392 142 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 COCHO43405 550 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 CALUO43852 315 aaPredicted RBP0.71□□□□□ -2.3
CCDC66-221ENST00000487739 NEMFO60524 1076 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 HPGDSO60760 199 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 TFPTP0C1Z6 253 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 SLCO1A2P46721 670 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 SKP1P63208 163 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 EBPQ15125 230 aaKnown RBP0.71□□□□□ -2.3
CCDC66-221ENST00000487739 MOGQ16653 247 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 FP248Q71RG6 208 aaPredicted RBP0.71□□□□□ -2.3
CCDC66-221ENST00000487739 SLC36A1Q7Z2H8 476 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 UBL4BQ8N7F7 174 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 RNF133Q8WVZ7 376 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 GNPNAT1Q96EK6 184 aaPredicted RBP0.71□□□□□ -2.3
CCDC66-221ENST00000487739 PACRGQ96M98 296 aaPredicted RBP0.71□□□□□ -2.3
CCDC66-221ENST00000487739 CCL13Q99616 98 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 CST9LQ9H4G1 147 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 CXorf21Q9HAI6 301 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 EURLQ9NYK6 297 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 COQ4Q9Y3A0 265 aa0.71□□□□□ -2.3
CCDC66-221ENST00000487739 RAD50Q92878 1312 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 RALGAPA2Q2PPJ7 1873 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 TRAV7A0A075B6U4 112 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 TRAV38-1A0A0B4J264 116 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 A0A0D9SEW6 157 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 LINC00854A0A1B0GVQ3 168 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 H7C2G1 150 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 CREBL2O60519 120 aaPredicted RBP0.7□□□□□ -2.3
CCDC66-221ENST00000487739 APOMO95445 188 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 REG1AP05451 166 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 SERPINA7P05543 415 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 HIST1H1CP16403 213 aaKnown RBP0.7□□□□□ -2.3
CCDC66-221ENST00000487739 CD79BP40259 229 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 AKR1C3P42330 323 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 RAB14P61106 215 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 AP1S1P61966 158 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 RPL30P62888 115 aaKnown RBP0.7□□□□□ -2.3
CCDC66-221ENST00000487739 FKBP1AP62942 108 aaKnown RBP0.7□□□□□ -2.3
CCDC66-221ENST00000487739 PPP1R1AQ13522 171 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 LRRC75BQ2VPJ9 315 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 PLPPR5Q32ZL2 321 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 FAM173BQ6P4H8 233 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 SBSNQ6UWP8 590 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 UMODL1-AS1Q8N2C9 162 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 C15orf53Q8NAA6 179 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 OR2T27Q8NH04 317 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 SLC7A6Q92536 515 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 SMIM19Q96E16 107 aa0.7□□□□□ -2.3
CCDC66-221ENST00000487739 DHRS9Q9BPW9 319 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms