RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	SON	P18583	2426 aa	Known RBP	6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	IGHV1-3	A0A0C4DH29	117 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	C3orf85	A0A1B0GTC6	90 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565		H0YJW9	148 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	LY6L	H3BQJ8	138 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565		H7C2Y5	167 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	MPPED1	O15442	326 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	B3GALNT1	O75752	331 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	DHFR	P00374	187 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	IFNA2	P01563	188 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	SERPINE2	P07093	398 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	OR4E1	P0C645	316 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	F2R	P25116	425 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	RAG2	P55895	527 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	RPL30	P62888	115 aa	Known RBP	6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	PPP1R1A	Q13522	171 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	EIF4EBP1	Q13541	118 aa	Predicted RBP	6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	FHL2	Q14192	279 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	DIAPH2-AS1	Q14236	149 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	SLC9A3R2	Q15599	337 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	TMEM128	Q5BJH2	165 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	LDLRAD2	Q5SZI1	272 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	DHRS7B	Q6IAN0	325 aa	Predicted RBP	6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	GLDN	Q6ZMI3	551 aa	Predicted RBP	6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	C9orf139	Q6ZV77	190 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	LYG2	Q86SG7	212 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	SLC25A42	Q86VD7	318 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	PDPN	Q86YL7	162 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	SPAG16	Q8N0X2	631 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	ZNF383	Q8NA42	475 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	OR4S2	Q8NH73	311 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	CD300LF	Q8TDQ1	290 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	CASTOR1	Q8WTX7	329 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	C17orf50	Q8WW18	174 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	CAPSL	Q8WWF8	208 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	MALSU1	Q96EH3	234 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	BEX2	Q9BXY8	128 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	BEX1	Q9HBH7	125 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	GPN1	Q9HCN4	374 aa	Predicted RBP	6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	SLC35D1	Q9NTN3	355 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	GAB2	Q9UQC2	676 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	WASHC3	Q9Y3C0	194 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	F8	P00451	2351 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	ARHGAP32	A7KAX9	2087 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	DOCK11	Q5JSL3	2073 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	HIVEP2	P31629	2446 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	MTOR	P42345	2549 aa		6.16	□□□□□ -1.42
GARNL3-218	ENST00000487565	IGHV3-72	A0A0B4J1Y9	119 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	BTBD17	A6NE02	478 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	LINC00473	A8K010	186 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	RBFOX2	O43251	390 aa	Known RBP eCLIP	6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	FCGR3B	O75015	233 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	VENTX	O95231	258 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	CRYZL1	O95825	349 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	OR5AC1	P0C628	307 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	CT45A6	P0DMU7	189 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	CT45A5	P0DMU8	189 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	CT45A7	P0DMV0	189 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	RRAS	P10301	218 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	SRD5A1	P18405	259 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	BRS3	P32247	399 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	DHODH	Q02127	395 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	DHRS2	Q13268	280 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	TATDN3	Q17R31	274 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	LRRC75B	Q2VPJ9	315 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565		Q6ZRM9	215 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	DYNAP	Q8N1N2	210 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	TCTEX1D1	Q8N7M0	179 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	RNASE11	Q8TAA1	199 aa	Known RBP	6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	C22orf15	Q8WYQ4	148 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	DDB2	Q92466	427 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	TP53RK	Q96S44	253 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	SEC22C	Q9BRL7	303 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	MARVELD1	Q9BSK0	173 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	TMEM222	Q9H0R3	208 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	ALX4	Q9H161	411 aa	Predicted RBP	6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	COMMD9	Q9P000	198 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	KCNIP3	Q9Y2W7	256 aa		6.15	□□□□□ -1.42
GARNL3-218	ENST00000487565	NAV3	Q8IVL0	2385 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	PIGBOS1	A0A0B4J2F0	54 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	MDFIC2	A0A1B0GVS7	189 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	C9orf170	A2RU37	121 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	CREBL2	O60519	120 aa	Predicted RBP	6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	PROP1	O75360	226 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	ATG12	O94817	140 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	S1PR2	O95136	353 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	SFT2D2	O95562	160 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	IL5	P05113	134 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	SNRNP70	P08621	437 aa	Known RBP	6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	UCP1	P25874	307 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	PAX6	P26367	422 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	MC5R	P33032	325 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	AKR1C2	P52895	323 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	ERVK-16	P61578	105 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	SUPT4H1	P63272	117 aa	Known RBP	6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	HES1	Q14469	280 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	AANAT	Q16613	207 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	DEFB112	Q30KQ8	113 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565	TMEM268	Q5VZI3	342 aa		6.14	□□□□□ -1.43
GARNL3-218	ENST00000487565		Q71RC1	249 aa	Predicted RBP	6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms