RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 RNASE12Q5GAN4 147 aaKnown RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 CXorf66Q5JRM2 361 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 KPRPQ5T749 579 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF660Q6AZW8 331 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 KCTD9Q7L273 389 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 PPP1R27Q86WC6 154 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 TMEM17Q86X19 198 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 SNX29P2Q8IUI4 249 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 CLVS1Q8IUQ0 354 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 VKORC1L1Q8N0U8 176 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 OR5AP2Q8NGF4 316 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 OR5B12Q96R08 314 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 P2RX4Q99571 388 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 TSNAXQ99598 290 aaKnown RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 RNF5Q99942 180 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 GON7Q9BXV9 100 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 ALX4Q9H161 411 aaPredicted RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 CCL28Q9NRJ3 127 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 NECAP2Q9NVZ3 263 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 TAS2R8Q9NYW2 309 aa5.57□□□□□ -1.52
UBE4B-209ENST00000487244 MRPS7Q9Y2R9 242 aaKnown RBP5.57□□□□□ -1.52
UBE4B-209ENST00000487244 RAMP3O60896 148 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 SAA1P0DJI8 122 aaPredicted RBP5.56□□□□□ -1.52
UBE4B-209ENST00000487244 APELAP0DMC3 54 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 HLA-DMAP28067 261 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 PRSS3P35030 304 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 HRH1P35367 487 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 CBX5P45973 191 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 CDX1P47902 265 aaPredicted RBP5.56□□□□□ -1.52
UBE4B-209ENST00000487244 RAB25P57735 213 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 FXYD3Q14802 87 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 PDLIM3Q53GG5 364 aaPredicted RBP5.56□□□□□ -1.52
UBE4B-209ENST00000487244 C10orf55Q5SWW7 151 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 ASPHD1Q5U4P2 390 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 FOXB2Q5VYV0 432 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 UNQ5815/PRO19632Q6UWF5 114 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF562Q6V9R5 426 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 OVCH2Q7RTZ1 564 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 LYSMD2Q8IV50 215 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 LFNGQ8NES3 379 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 WFDC9Q8NEX5 89 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 GPX8Q8TED1 209 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 C4orf3Q8WVX3 66 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 TCTEX1D2Q8WW35 142 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 ARPC1AQ92747 370 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 ADTRPQ96IZ2 230 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 SLC5A7Q9GZV3 580 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 MIXL1Q9H2W2 232 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 ZFP57Q9NU63 452 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 EHFQ9NZC4 300 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 FOXA2Q9Y261 457 aaPredicted RBP5.56□□□□□ -1.52
UBE4B-209ENST00000487244 NUBP2Q9Y5Y2 271 aa5.56□□□□□ -1.52
UBE4B-209ENST00000487244 FAM25AB3EWG3 89 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 FAM25CB3EWG5 89 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 FAM25GB3EWG6 89 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 I3L521 148 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 CCL24O00175 119 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 SULT1C2O00338 296 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 CTDSP2O14595 271 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 RRASP10301 218 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF182P17025 639 aaPredicted RBP5.55□□□□□ -1.52
UBE4B-209ENST00000487244 NAT1P18440 290 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 HOXD3P31249 432 aaPredicted RBP5.55□□□□□ -1.52
UBE4B-209ENST00000487244 MYCNOSP40205 109 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 LGALS7P47929 136 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 RAB9AP51151 201 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 KRTAP10-11P60412 298 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 UBE2KP61086 200 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 CBX3Q13185 183 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 DYRK1AQ13627 763 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 PRSS8Q16651 343 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 ACTBL2Q562R1 376 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 TMEM65Q6PI78 240 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF818PQ6ZRF7 136 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 LAX1Q8IWV1 398 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF491Q8N8L2 437 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 OR5T1Q8NG75 326 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 OR5H2Q8NGV7 314 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 OSR1Q8TAX0 266 aaPredicted RBP5.55□□□□□ -1.52
UBE4B-209ENST00000487244 DYNC2LI1Q8TCX1 351 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 ACOT12Q8WYK0 555 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 CMTM3Q96MX0 182 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 MS4A10Q96PG2 267 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 HSD17B10Q99714 261 aaKnown RBP5.55□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF2Q9BSG1 426 aaPredicted RBP5.55□□□□□ -1.52
UBE4B-209ENST00000487244 DCUN1D5Q9BTE7 237 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 FXYD6Q9H0Q3 95 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 ZNF430Q9H8G1 570 aaPredicted RBP5.55□□□□□ -1.52
UBE4B-209ENST00000487244 EXTL2Q9UBQ6 330 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 DNAH3Q8TD57 4116 aa5.55□□□□□ -1.52
UBE4B-209ENST00000487244 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
UBE4B-209ENST00000487244 SMIM31A0A1B0GVY4 71 aa5.54□□□□□ -1.52
UBE4B-209ENST00000487244 A0A1B0GW64 132 aa5.54□□□□□ -1.52
UBE4B-209ENST00000487244 ANKRD34BA5PLL1 514 aa5.54□□□□□ -1.52
UBE4B-209ENST00000487244 MSGN1A6NI15 193 aa5.54□□□□□ -1.52
UBE4B-209ENST00000487244 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
UBE4B-209ENST00000487244 H3BMQ9 156 aa5.54□□□□□ -1.52
UBE4B-209ENST00000487244 M0QYG6 137 aa5.54□□□□□ -1.52
UBE4B-209ENST00000487244 RBMXL2O75526 392 aaKnown RBP5.54□□□□□ -1.52
UBE4B-209ENST00000487244 SLC22A5O76082 557 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms