RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 C9orf135Q5VTT2 229 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 Q6ZS49 121 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 GTF2H5Q6ZYL4 71 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 VASH2Q86V25 355 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 DOLPP1Q86YN1 238 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM54Q969K7 222 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 ZNF837Q96EG3 531 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-209ENST00000487188 FOXB1Q99853 325 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 CLEC7AQ9BXN2 247 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 SEPSECSQ9HD40 501 aaKnown RBP5.26□□□□□ -1.57
VPS13D-209ENST00000487188 FGF21Q9NSA1 209 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 CLEC1BQ9P126 229 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 ANKRD30BLA7E2S9 258 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 SYNGR3O43761 229 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 DUX1O43812 170 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 GABRA6Q16445 453 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 CENPWQ5EE01 88 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 MIC13Q5XKP0 118 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 PARM1Q6UWI2 310 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 MOB1BQ7L9L4 216 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 PLXDC1Q8IUK5 500 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 OR1L1Q8NH94 360 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 OR2D2Q9H210 308 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 PEF1Q9UBV8 284 aaKnown RBP5.26□□□□□ -1.57
VPS13D-209ENST00000487188 HELTA6NFD8 242 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 ACTL6BO94805 426 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 IGHV3-9P01782 118 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 CRYGSP22914 178 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 CA6P23280 308 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 FABP6P51161 128 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 OR1D5P58170 312 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 RHOBP62745 196 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 Q5PR19 223 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 PQLC2Q6ZP29 291 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 ANKRD37Q7Z713 158 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 ABHD3Q8WU67 409 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 TSKUQ8WUA8 353 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 EAF1Q96JC9 268 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-209ENST00000487188 OR8B2Q96RD0 313 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 OR2H1Q9GZK4 316 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM191AQ9H0A3 160 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM38BQ9NVV0 291 aa5.26□□□□□ -1.57
VPS13D-209ENST00000487188 CHTOPQ9Y3Y2 248 aaKnown RBP5.26□□□□□ -1.57
VPS13D-209ENST00000487188 GAGE12BA1L429 117 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 OR4C46A6NHA9 309 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 LRRC30A6NM36 301 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 SYNGR1O43759 233 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 CA7P43166 264 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 RNPS1Q15287 305 aaKnown RBP5.25□□□□□ -1.57
VPS13D-209ENST00000487188 PRAMEF5Q5TYX0 476 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 PRAMEF6Q5VXH4 476 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 DRAM1Q8N682 238 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 OR4P4Q8NGL7 312 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 SPACA9Q96E40 222 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-209ENST00000487188 SAP30LQ9HAJ7 183 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 ENY2Q9NPA8 101 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 IL23AQ9NPF7 189 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 CRIM1Q9NZV1 1036 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 CABIN1Q9Y6J0 2220 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 GJE1A6NN92 205 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 ZNHIT1O43257 154 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 IGLL1P15814 213 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 GCHFRP30047 84 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 SRSF7Q16629 238 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13D-209ENST00000487188 SLC25A53Q5H9E4 307 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM42Q69YG0 159 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 OR4A16Q8NH70 328 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 TAAR6Q96RI8 345 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 SFXN3Q9BWM7 321 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 HINT2Q9BX68 163 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 RNASE7Q9H1E1 156 aaKnown RBP5.25□□□□□ -1.57
VPS13D-209ENST00000487188 GTF3C1Q12789 2109 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 TRBV20OR9-2A0A075B6H5 130 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 MUC21A0A0G2JKD1 596 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 MUC21A0A140T8X8 626 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 FAM181BA6NEQ2 426 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 FRMD6-AS1P0C7T7 363 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 CAMPP49913 170 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 MFAP2P55001 183 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 ERVK-16P61578 105 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 MUC21Q5SSG8 566 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-209ENST00000487188 IBA57Q5T440 356 aaKnown RBP5.25□□□□□ -1.57
VPS13D-209ENST00000487188 DCAF12Q5T6F0 453 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 PET117Q6UWS5 81 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 S100A7AQ86SG5 101 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 MUC15Q8N387 334 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 OR2T6Q8NHC8 308 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 TMEM70Q9BUB7 260 aa5.25□□□□□ -1.57
VPS13D-209ENST00000487188 REPIN1Q9BWE0 567 aaKnown RBP5.25□□□□□ -1.57
VPS13D-209ENST00000487188 C5orf49A4QMS7 147 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 SELENOVP59797 346 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 RPS20P60866 119 aaKnown RBP5.24□□□□□ -1.57
VPS13D-209ENST00000487188 FAM162BQ5T6X4 162 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 PCSK4Q6UW60 755 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 IFI44Q8TCB0 444 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 SPSB4Q96A44 273 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 GUCD1Q96NT3 240 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 TRIB1Q96RU8 372 aa5.24□□□□□ -1.57
VPS13D-209ENST00000487188 CHRDL1Q9BU40 450 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms