RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 MED12Q93074 2177 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 IGHV3OR16-8A0A075B7F1 116 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 TRGV5A0A0B4J1U4 118 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 TMEM213A2RRL7 107 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 ZNF860A6NHJ4 632 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 DEFB108AA8MXU0 73 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 C16orf90A8MZG2 172 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 ITGB1BP1O14713 200 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 NSA2O95478 260 aaKnown RBP2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 CMPK1P30085 196 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 MPV17P39210 176 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 GDI2P50395 445 aaKnown RBP2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 ZNF140P52738 457 aaPredicted RBP2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 OR4D2P58180 307 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 TSPAN5P62079 268 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 FAM53BQ14153 422 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 PDK2Q15119 407 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 TAF1AQ15573 450 aaPredicted RBP2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 CCSMST1Q4G0I0 132 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 C6orf52Q5T4I8 152 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 KPRPQ5T749 579 aaPredicted RBP2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 CLEC19AQ6UXS0 136 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 ZNF738Q8NE65 137 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 KLF14Q8TD94 323 aaPredicted RBP2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 DOK4Q8TEW6 326 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 ORAOV1Q8WV07 137 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 ARL5BQ96KC2 179 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 OLFM3Q96PB7 478 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 DERL3Q96Q80 235 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 SPACA5Q96QH8 159 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 MRPL20Q9BYC9 149 aaKnown RBP2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 REG4Q9BYZ8 158 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 NDEL1Q9GZM8 345 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 WDR55Q9H6Y2 383 aaPredicted RBP2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 ANXA10Q9UJ72 324 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 FREM1Q5H8C1 2179 aa2.7□□□□□ -1.98
PRPF38A-203ENST00000487160 VWFP04275 2813 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 TRRAPQ9Y4A5 3859 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 OR51F1A6NGY5 319 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 MFNGO00587 321 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 OR1I1O60431 355 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 ADAP1O75689 374 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 OR2J2O76002 312 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 EPPINO95925 133 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 KDELR1P24390 212 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 CCR7P32248 378 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 MPIP34949 423 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 XKP51811 444 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 RBX1P62877 108 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 DYNLT1P63172 113 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 TPM4P67936 248 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 DEFA6Q01524 100 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 STX4Q12846 297 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 BSXQ3C1V8 233 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 OR10J3Q5JRS4 329 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 ZNF678Q5SXM1 525 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 PRR9Q5T870 116 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 LCE3AQ5TA76 89 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 PRNTQ86SH4 94 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 ZNF567Q8N184 647 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 CCNYL1Q8N7R7 359 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 PLPP5Q8NEB5 264 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 RNASEH2CQ8TDP1 164 aaKnown RBP2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 RAD51AP1Q96B01 352 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 YIPF6Q96EC8 236 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 RILPQ96NA2 401 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 SRRQ9GZT4 340 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 C12orf4Q9NQ89 552 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 TAC3Q9UHF0 121 aa2.69□□□□□ -1.98
PRPF38A-203ENST00000487160 TXNDC9O14530 226 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 NIPSNAP2O75323 286 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 E2F6O75461 281 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 MYO1DO94832 1006 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 TNFAIP8O95379 198 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 TPM3P06753 285 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 SEC11BP0C7V7 166 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 CCL3P10147 92 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 CRYGSP22914 178 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 MSNP26038 577 aaKnown RBP2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 RPA3P35244 121 aaPredicted RBP2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 OPRM1P35372 400 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 IDH2P48735 452 aaKnown RBP2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 BTG2P78543 158 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 CD164Q04900 197 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 ATP5G2Q06055 141 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 TBPL2Q6SJ96 375 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 CASP12Q6UXS9 341 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 ZNF550Q7Z398 422 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 VN1R4Q7Z5H5 301 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 KRT222Q8N1A0 295 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 SKA2Q8WVK7 121 aaPredicted RBP2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 TNFRSF14Q92956 283 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 ZMYND19Q96E35 227 aaPredicted RBP2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 VAT1Q99536 393 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 MED18Q9BUE0 208 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 NOTCH1P46531 2555 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 ROS1P08922 2347 aa2.68□□□□□ -1.98
PRPF38A-203ENST00000487160 A0A096LNT2 108 aa2.67□□□□□ -1.98
PRPF38A-203ENST00000487160 IGKV3D-11A0A0A0MRZ8 115 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms