RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SNRPD2P62316 118 aaKnown RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 TNFRSF9Q07011 255 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 FABP9Q0Z7S8 132 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ELOCQ15369 112 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 RSU1Q15404 277 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 GUSBP1Q15486 140 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 OR8G1Q15617 311 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 GOLGA7BQ2TAP0 167 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 C18orf21Q32NC0 220 aaPredicted RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 CLLU1OSQ5K130 101 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 MRPL2Q5T653 305 aaKnown RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ZFAND6Q6FIF0 208 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 GLYATQ6IB77 296 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 LPCAT3Q6P1A2 487 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 SPNS3Q6ZMD2 512 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 CYHR1Q6ZMK1 362 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 FAM183BPQ6ZVS7 135 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 CALHM3Q86XJ0 350 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 RBM45Q8IUH3 476 aaKnown RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 FUNDC1Q8IVP5 155 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 GAPTQ8N292 157 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 C9orf62Q8N4C0 152 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ACBD7Q8N6N7 88 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 OR8D4Q8NGM9 314 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 OR2T4Q8NH00 348 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 OR4K15Q8NH41 348 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 OR10J5Q8NHC4 309 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 UBA3Q8TBC4 463 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 TMBIM1Q969X1 311 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 C14orf144Q96I85 54 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF514Q96K75 400 aaPredicted RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 LINC00052Q96N35 136 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 MBOAT7Q96N66 472 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 PEBP4Q96S96 227 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 HBEGFQ99075 208 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 KLF6Q99612 283 aaPredicted RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 EBNA1BP2Q99848 306 aaKnown RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ASB7Q9H672 318 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 FAM60AQ9NP50 221 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF302Q9NR11 478 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 RASL12Q9NYN1 266 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 OPTCQ9UBM4 332 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 USP54Q70EL1 1684 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 FAM208AQ9UK61 1670 aaKnown RBP1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 ANKRD36CQ5JPF3 1778 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 FER1L6Q2WGJ9 1857 aa1.82□□□□□ -2.12
SNRNP27-204ENST00000487029 LOXHD1Q8IVV2 1947 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 C2orf16Q68DN1 1984 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 OTOFQ9HC10 1997 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 MED1Q15648 1581 aaPredicted RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 DEPDC5O75140 1603 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 RAPGEF6Q8TEU7 1601 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 ZNF142P52746 1687 aaPredicted RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 RGPD8O14715 1765 aaPredicted RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 RGPD5Q99666 1765 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 A0A096LPI6 279 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 A0A0D9SG52 128 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 LOC389332A0A1B0GUA5 103 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 LOC100130705A0A1B0GUX0 176 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 NAP1L6A6NFF2 107 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 MGAT4DA6NG13 374 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 IQCF5A8MTL0 148 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 MKRN2OSH3BPM6 223 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 UPK2O00526 184 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 TP53I11O14683 189 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 FABP7O15540 132 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 LYRM1O43325 122 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 COCHO43405 550 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 ENSAO43768 121 aaKnown RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 SLC37A4O43826 429 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 OR2T1O43869 369 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 HPGDSO60760 199 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 STK16O75716 305 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 FSTL3O95633 263 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 PPBPP02775 128 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 CRHP06850 196 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 GIMD1P0DJR0 217 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 SPNP16150 400 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 HIST1H1BP16401 226 aaKnown RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 NFYAP23511 347 aaPredicted RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 PSMA1P25786 263 aaKnown RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 FAUP35544 74 aaKnown RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 ACOT2P49753 483 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 RPL14P50914 215 aaKnown RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 KLF3P57682 345 aaPredicted RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 OR10A3P58181 314 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 RPS20P60866 119 aaKnown RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 CDC42P60953 191 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 LSM3P62310 102 aaKnown RBP1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 EMX2Q04743 252 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 C2orf80Q0P641 193 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 TRAM1Q15629 374 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 SSX1Q16384 188 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 TNXAQ16473 311 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 TAF9Q16594 264 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 CEACAM16Q2WEN9 425 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 SCGB2B2Q4G0G5 96 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 CLEC12AQ5QGZ9 265 aa1.81□□□□□ -2.12
SNRNP27-204ENST00000487029 COL5A1-AS1Q5SY13 56 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms