RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 NINJ1Q92982 152 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 TMEM68Q96MH6 324 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 WNT10AQ9GZT5 417 aa10.37□□□□□ -0.75
HSPG2-211ENST00000486901 HEYLQ9NQ87 328 aaPredicted RBP10.37□□□□□ -0.75
HSPG2-211ENST00000486901 CA1P00915 261 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-211ENST00000486901 NTF3P20783 257 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 FABP6P51161 128 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 BRWD1-AS2P59051 145 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 Q6P435 159 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 TMEM14EPQ6UXP3 125 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 Q6ZR03 302 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 PPP1R32Q7Z5V6 425 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 GCM1Q9NP62 436 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 TP73-AS1Q9UF72 201 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 CEP192Q8TEP8 1941 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 FCN1O00602 326 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 SYNGR4O95473 234 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 HBZP02008 142 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 COLCA1Q6ZS62 124 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 TIPARPQ7Z3E1 657 aaKnown RBP10.36□□□□□ -0.75
HSPG2-211ENST00000486901 TLN1Q9Y490 2541 aaKnown RBP10.36□□□□□ -0.75
HSPG2-211ENST00000486901 PDLIM3Q53GG5 364 aaPredicted RBP10.36□□□□□ -0.75
HSPG2-211ENST00000486901 LHFPL4Q7Z7J7 247 aa10.36□□□□□ -0.75
HSPG2-211ENST00000486901 MAP1AP78559 2803 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 TCF21O43680 179 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 OR9G9P0C7N8 305 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 ARG2P78540 354 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 ACOT6Q3I5F7 207 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 KRTCAP3Q53RY4 240 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 MOB3BQ86TA1 216 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 DOLPP1Q86YN1 238 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 ST6GALNAC3Q8NDV1 305 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 RNASEH2CQ8TDP1 164 aaKnown RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 GALMQ96C23 342 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 PYGO2Q9BRQ0 406 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 SERTAD4Q9NUC0 356 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 KCNIP1Q9NZI2 227 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 ZNF391Q9UJN7 358 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 SELENOKQ9Y6D0 94 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 CREBBPQ92793 2442 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 LOC102723996A0A087X1L8 192 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 IGHV3-48P01763 117 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 TRA2AQ13595 282 aaKnown RBP eCLIP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 MMDQ15546 238 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 ARSJQ5FYB0 599 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 ATP1A1-AS1Q5TC04 95 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 MRPL54Q6P161 138 aaKnown RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 KCNE4Q8WWG9 221 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 LSM10Q969L4 123 aaKnown RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 SFRP2Q96HF1 295 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 SGK494Q96LW2 274 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 GOLT1BQ9Y3E0 138 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 TIMM8BQ9Y5J9 83 aaPredicted RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 HCFC1P51610 2035 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 SNURFLB1AK76 121 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 WISP2O76076 250 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 CRISP2P16562 243 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 MAJINQ3KP22 176 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 RPL39P5Q59GN2 51 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 DBX2Q6ZNG2 339 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 OR8I2Q8N0Y5 310 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 ACY3Q96HD9 319 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 DUSP23Q9BVJ7 150 aa10.35□□□□□ -0.75
HSPG2-211ENST00000486901 SEPSECSQ9HD40 501 aaKnown RBP10.35□□□□□ -0.75
HSPG2-211ENST00000486901 TMEM250H0YL14 139 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 OR10J4P0C629 311 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 KRTAP27-1Q3LI81 207 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 RIPPLY2Q5TAB7 128 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 SH2D2AQ9NP31 389 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 TP53TG3Q9ULZ0 132 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 YLPM1P49750 1951 aaKnown RBP10.34□□□□□ -0.75
HSPG2-211ENST00000486901 TOX3O15405 576 aaPredicted RBP10.34□□□□□ -0.75
HSPG2-211ENST00000486901 GGCTO75223 188 aaKnown RBP10.34□□□□□ -0.75
HSPG2-211ENST00000486901 HAND1O96004 215 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 CD1BP29016 333 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 TIMP3P35625 211 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 PRAMEF5Q5TYX0 476 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 CISD2Q8N5K1 135 aaKnown RBP10.34□□□□□ -0.75
HSPG2-211ENST00000486901 MRPL18Q9H0U6 180 aaKnown RBP10.34□□□□□ -0.75
HSPG2-211ENST00000486901 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
HSPG2-211ENST00000486901 ZNF703Q9H7S9 590 aaPredicted RBP10.34□□□□□ -0.75
HSPG2-211ENST00000486901 YTHDF2Q9Y5A9 579 aaKnown RBP10.34□□□□□ -0.75
HSPG2-211ENST00000486901 MARCH11A6NNE9 402 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 NEURL1O76050 574 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 GFRA1P56159 465 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 MSMO1Q15800 293 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 OR13A1Q8NGR1 328 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 ANAPC16Q96DE5 110 aa10.34□□□□□ -0.75
HSPG2-211ENST00000486901 INTS1Q8N201 2190 aaKnown RBP10.33□□□□□ -0.76
HSPG2-211ENST00000486901 TANC2Q9HCD6 1990 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 WNT2P09544 360 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 MPV17P39210 176 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 RPL15P61313 204 aaKnown RBP10.33□□□□□ -0.76
HSPG2-211ENST00000486901 RPL31P62899 125 aaKnown RBP10.33□□□□□ -0.76
HSPG2-211ENST00000486901 ZNF497Q6ZNH5 498 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 TGIF2LYQ8IUE0 185 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 OR1L6Q8NGR2 347 aa10.33□□□□□ -0.76
HSPG2-211ENST00000486901 SLC25A40Q8TBP6 338 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms