RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 SLC35B1P78383 322 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 ZNF718Q3SXZ3 478 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 LDLRAD2Q5SZI1 272 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 AAED1Q7RTV5 226 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 VASH2Q86V25 355 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 OR5B3Q8NH48 314 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 BORCS7Q96B45 105 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 EAF1Q96JC9 268 aaPredicted RBP8.91□□□□□ -0.98
CCDC171-208ENST00000486641 PRDM14Q9GZV8 571 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 CST9LQ9H4G1 147 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 MMP17Q9ULZ9 603 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 WDR83OSQ9Y284 106 aa8.91□□□□□ -0.98
CCDC171-208ENST00000486641 ESPL1Q14674 2120 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 CLDN14O95500 239 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 PCBD1P61457 104 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 TGFBR3Q03167 851 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 OCIAD2Q56VL3 154 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 VHLLQ6RSH7 139 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 COLCA1Q6ZS62 124 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 C19orf35Q6ZS72 473 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 MUC15Q8N387 334 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 PNKDQ8N490 385 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 C19orf25Q9UFG5 118 aaPredicted RBP8.9□□□□□ -0.98
CCDC171-208ENST00000486641 CD207Q9UJ71 328 aa8.9□□□□□ -0.98
CCDC171-208ENST00000486641 A0A1W2PRS3 328 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 BMPR1BO00238 502 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 CXorf1O96002 111 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 DSCR4P56555 118 aaPredicted RBP8.89□□□□□ -0.99
CCDC171-208ENST00000486641 CX3CL1P78423 397 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 ZXDAP98168 799 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 LINC00596Q86U02 117 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 FAM58AQ8N1B3 248 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 ZNF439Q8NDP4 499 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 SF3B5Q9BWJ5 86 aaKnown RBP8.89□□□□□ -0.99
CCDC171-208ENST00000486641 CSTL1Q9H114 145 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 OR2D2Q9H210 308 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 CLEC1BQ9P126 229 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 TRAPPC2LQ9UL33 140 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 OR5B21A6NL26 309 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 C15orf62A8K5M9 175 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 RNF212BA8MTL3 300 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 LMO7DNF2Z398 122 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 DUX1O43812 170 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 RBMXL2O75526 392 aaKnown RBP8.89□□□□□ -0.99
CCDC171-208ENST00000486641 MT-ND6P03923 174 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 CELA2AP08217 269 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 CCL3P10147 92 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 LIFP15018 202 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 IGLL1P15814 213 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 BRWD1-AS2P59051 145 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 ARG2P78540 354 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 RHOGP84095 191 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 RPL19P84098 196 aaKnown RBP8.89□□□□□ -0.99
CCDC171-208ENST00000486641 RELBQ01201 579 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 IGFBP7Q16270 282 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 WDR73Q6P4I2 378 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 PROK2Q9HC23 129 aa8.89□□□□□ -0.99
CCDC171-208ENST00000486641 TRAV9-2A0A087WT02 112 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 TRGV10A0A0A0MS01 117 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 ZNF716A6NP11 495 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 IGLV3-19P01714 112 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 PSG1P11464 419 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 SPATA46Q5T0L3 261 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 MIC13Q5XKP0 118 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 FAM53AQ6NSI3 398 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-208ENST00000486641 Q6P435 159 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 MRPL21Q7Z2W9 205 aaKnown RBP8.88□□□□□ -0.99
CCDC171-208ENST00000486641 C5orf30Q96GV9 206 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 HES4Q9HCC6 221 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 PRDM6Q9NQX0 595 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 ZNF891A8MT65 544 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-208ENST00000486641 C17orf98A8MV24 154 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 C9JCJ5 164 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 RHBDL1O75783 438 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 IGHV3-9P01782 118 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 TCL1AP56279 114 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 RAC3P60763 192 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 FXYD3Q14802 87 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 ZNF808Q8N4W9 903 aaPredicted RBP8.88□□□□□ -0.99
CCDC171-208ENST00000486641 OR4P4Q8NGL7 312 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 NEUROG1Q92886 237 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 RNASE7Q9H1E1 156 aaKnown RBP8.88□□□□□ -0.99
CCDC171-208ENST00000486641 MRPL27Q9P0M9 148 aaKnown RBP8.88□□□□□ -0.99
CCDC171-208ENST00000486641 TP73-AS1Q9UF72 201 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 LY96Q9Y6Y9 160 aa8.88□□□□□ -0.99
CCDC171-208ENST00000486641 A0A1W2PR77 199 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 H0YJW9 148 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 FOXH1O75593 365 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 GLB1P16278 677 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 CA6P23280 308 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 GCHFRP30047 84 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 OPRK1P41145 380 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 RHOBP62745 196 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 Q56UQ5 140 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 LRRC10Q5BKY1 277 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 EBLN2Q6P2I7 272 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 TREML4Q6UXN2 200 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 ZNF497Q6ZNH5 498 aa8.87□□□□□ -0.99
CCDC171-208ENST00000486641 ZNF645Q8N7E2 425 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms