RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 JAM3Q9BX67 310 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 ZNF436Q9C0F3 470 aaPredicted RBP5.85□□□□□ -1.47
XRN1-212ENST00000486211 C11orf54Q9H0W9 315 aaPredicted RBP5.85□□□□□ -1.47
XRN1-212ENST00000486211 ISG20L2Q9H9L3 353 aaKnown RBP5.85□□□□□ -1.47
XRN1-212ENST00000486211 ZNF556Q9HAH1 456 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 SLC35D1Q9NTN3 355 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 KLK9Q9UKQ9 250 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 ZNF257Q9Y2Q1 563 aa5.85□□□□□ -1.47
XRN1-212ENST00000486211 ZNF780AO75290 641 aaPredicted RBP5.84□□□□□ -1.47
XRN1-212ENST00000486211 GLAP06280 429 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 HTR1AP08908 422 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 ANXA8P13928 327 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 FAM3BP58499 235 aaPredicted RBP5.84□□□□□ -1.47
XRN1-212ENST00000486211 C12orf73Q69YU5 71 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 MORN3Q6PF18 240 aaPredicted RBP5.84□□□□□ -1.47
XRN1-212ENST00000486211 IDO2Q6ZQW0 420 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 CEACAM19Q7Z692 300 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 ZNRF2Q8NHG8 242 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 RNF167Q9H6Y7 350 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 SLC2A9Q9NRM0 540 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 PAK1IP1Q9NWT1 392 aaPredicted RBP5.84□□□□□ -1.47
XRN1-212ENST00000486211 TAS2R4Q9NYW5 299 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 LRRC42Q9Y546 428 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 ETV7Q9Y603 341 aa5.84□□□□□ -1.47
XRN1-212ENST00000486211 MFSD2BA6NFX1 497 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 HMX3A6NHT5 357 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 TEX22C9J3V5 150 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 SLC16A6O15403 523 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 MRPS14O60783 128 aaKnown RBP5.83□□□□□ -1.48
XRN1-212ENST00000486211 BAG2O95816 211 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 CST1P01037 141 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 SMR3BP02814 79 aaPredicted RBP5.83□□□□□ -1.48
XRN1-212ENST00000486211 CLEC3BP05452 202 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 BTF3P20290 206 aaKnown RBP5.83□□□□□ -1.48
XRN1-212ENST00000486211 C4BPBP20851 252 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 FUT3P21217 361 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 ZNF93P35789 620 aaPredicted RBP5.83□□□□□ -1.48
XRN1-212ENST00000486211 SOX2P48431 317 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 UBE2KP61086 200 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 TEX45Q8NA69 505 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 ACOT12Q8WYK0 555 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 PTX4Q96A99 478 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 EEF1AKMT3Q96AZ1 226 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 CMTM5Q96DZ9 223 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 SPIN2AQ99865 258 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 SPIN2BQ9BPZ2 258 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 NICN1Q9BSH3 213 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 YTHDF1Q9BYJ9 559 aaKnown RBP5.83□□□□□ -1.48
XRN1-212ENST00000486211 ZNF430Q9H8G1 570 aaPredicted RBP5.83□□□□□ -1.48
XRN1-212ENST00000486211 DAZ1Q9NQZ3 744 aaKnown RBP5.83□□□□□ -1.48
XRN1-212ENST00000486211 OR1A1Q9P1Q5 309 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 ZNF221Q9UK13 617 aa5.83□□□□□ -1.48
XRN1-212ENST00000486211 TRBV7-1A0A0A6YYK4 115 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 A0A1B0GW64 132 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 NPIPB5A8MRT5 1133 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 J3QRE1 110 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 M0R1X1 148 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 CCDC22O60826 627 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 RPA2P15927 270 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 GPR183P32249 361 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 CMC4P56277 68 aaPredicted RBP5.82□□□□□ -1.48
XRN1-212ENST00000486211 IRF3Q14653 427 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 DDI2Q5TDH0 399 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 LIPKQ5VXJ0 399 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 ZNF880Q6PDB4 577 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 Q6ZSN1 163 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 SLC25A42Q86VD7 318 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 CSNK1G2-AS1Q8NCQ2 148 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 S100A13Q99584 98 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 PDCD1LG2Q9BQ51 273 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 PRRG3Q9BZD7 231 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 ARL8BQ9NVJ2 186 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 ABRACLQ9P1F3 81 aa5.82□□□□□ -1.48
XRN1-212ENST00000486211 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 ZAR1LA6NP61 321 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 E7EUB6 86 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 TGOLN2O43493 480 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 PDCD6O75340 191 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 CRYGCP07315 174 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 RAP2AP10114 183 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 NPY1RP25929 384 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 PRDX6P30041 224 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 CEACAM6P40199 344 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 TFPI2P48307 235 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 C21orf62-AS1Q17RA5 79 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 VMA21Q3ZAQ7 101 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 TMEM41BQ5BJD5 291 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 SSX9Q7RTT3 188 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 ZNF502Q8TBZ5 544 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 C5orf30Q96GV9 206 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 C4orf36Q96KX1 117 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 FYTTD1Q96QD9 318 aaKnown RBP5.81□□□□□ -1.48
XRN1-212ENST00000486211 RNF2Q99496 336 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 BANF2Q9H503 90 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 TMEM138Q9NPI0 162 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 TBC1D24Q9ULP9 559 aa5.81□□□□□ -1.48
XRN1-212ENST00000486211 IGLV11-55A0A075B6I3 123 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 TMEM212A6NML5 194 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 E9PI62 339 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 J3QLW9 94 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms