RNA–Protein interactions for RNA: ENST00000486085.5

RTN4-214, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-214ENST00000486085 GLRXP35754 106 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 RPL5P46777 297 aaKnown RBP3.91□□□□□ -1.78
RTN4-214ENST00000486085 RPS10P46783 165 aaKnown RBP3.91□□□□□ -1.78
RTN4-214ENST00000486085 CEBPGP53567 150 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 SPCS3P61009 180 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 RPS23P62266 143 aaKnown RBP3.91□□□□□ -1.78
RTN4-214ENST00000486085 CDK5R1Q15078 307 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 OR8B8Q15620 311 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 TBC1D28Q2M2D7 210 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 PABPC1L2AQ5JQF8 200 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 NCMAPQ5T1S8 102 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 PRAMEF5Q5TYX0 476 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 PRAMEF6Q5VXH4 476 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 AHSA2Q719I0 299 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 LUZP2Q86TE4 346 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 MDP1Q86V88 176 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 STX19Q8N4C7 294 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 MS4A15Q8N5U1 240 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 SLC30A7Q8NEW0 376 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 OR2G2Q8NGZ5 317 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 RORBQ92753 470 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 UFD1Q92890 307 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 APOBEC3DQ96AK3 386 aaPredicted RBP3.91□□□□□ -1.78
RTN4-214ENST00000486085 PGLYRP3Q96LB9 341 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 AMELYQ99218 206 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 DOK1Q99704 481 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 DHRS9Q9BPW9 319 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 GEMIN7Q9H840 131 aaKnown RBP3.91□□□□□ -1.78
RTN4-214ENST00000486085 NOX3Q9HBY0 568 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 VCX3AQ9NNX9 186 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 ABCB9Q9NP78 766 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 ZNF331Q9NQX6 463 aaPredicted RBP3.91□□□□□ -1.78
RTN4-214ENST00000486085 C19orf12Q9NSK7 152 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 NDUFB11Q9NX14 153 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 RHBDL2Q9NX52 303 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 TBC1D24Q9ULP9 559 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 NBPF19A0A087WUL8 3843 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 SPG11Q96JI7 2443 aa3.91□□□□□ -1.78
RTN4-214ENST00000486085 A0A0A6YYH2 397 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 IGHV2OR16-5A0A0B4J2B6 119 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 IGHV1-18A0A0C4DH31 117 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 TVP23AA6NH52 213 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 A6NJ64 397 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 DEFB108AA8MXU0 73 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 LOC110117498-PIK3R3F6TDL0 507 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 MYL12BO14950 172 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 CA11O75493 328 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 GATBO75879 557 aaKnown RBP3.9□□□□□ -1.79
RTN4-214ENST00000486085 FSTL3O95633 263 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 HLA-HP01893 362 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 TTRP02766 147 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 CECR9P0C854 216 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 RCC1P18754 421 aaPredicted RBP3.9□□□□□ -1.79
RTN4-214ENST00000486085 KITLGP21583 273 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 APLNRP35414 380 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 GNG10P50151 68 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 RAB9AP51151 201 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 DLX1P56177 255 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 ACTBP60709 375 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 RPS11P62280 158 aaKnown RBP eCLIP3.9□□□□□ -1.79
RTN4-214ENST00000486085 RAB11AP62491 216 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 ACTG1P63261 375 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 RAB11BQ15907 218 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 TMEM244Q5VVB8 128 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 TMEM42Q69YG0 159 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 ACP7Q6ZNF0 438 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 SSX6Q7RTT6 188 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 LRRC75A-AS1Q8N1F1 130 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 C19orf18Q8NEA5 215 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 OR51L1Q8NGJ5 315 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 OR5L1Q8NGL2 311 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 OR5D13Q8NGL4 314 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 ZNF420Q8TAQ5 688 aaPredicted RBP3.9□□□□□ -1.79
RTN4-214ENST00000486085 DTD1Q8TEA8 209 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 CACNG8Q8WXS5 425 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 WFIKKN1Q96NZ8 548 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 MGLLQ99685 303 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 SLC22A4Q9H015 551 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 TOLLIPQ9H0E2 274 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 GAL3ST2Q9H3Q3 398 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 POLR1DQ9Y2S0 133 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 NOP16Q9Y3C1 178 aaKnown RBP3.9□□□□□ -1.79
RTN4-214ENST00000486085 RHBDD3Q9Y3P4 386 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 V9GYS6 101 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 ABCA12Q86UK0 2595 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 CREBBPQ92793 2442 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 ASH1LQ9NR48 2969 aaKnown RBP3.9□□□□□ -1.79
RTN4-214ENST00000486085 DOPEY2Q9Y3R5 2298 aa3.9□□□□□ -1.79
RTN4-214ENST00000486085 HRNRQ86YZ3 2850 aaPredicted RBP3.89□□□□□ -1.79
RTN4-214ENST00000486085 TRAV1-2A0A0B4J238 106 aa3.89□□□□□ -1.79
RTN4-214ENST00000486085 A0A1B0GTI1 187 aa3.89□□□□□ -1.79
RTN4-214ENST00000486085 SMIM31A0A1B0GVY4 71 aa3.89□□□□□ -1.79
RTN4-214ENST00000486085 TMEM269A0A1B0GVZ9 245 aa3.89□□□□□ -1.79
RTN4-214ENST00000486085 TRDV1A0A1B0GX56 115 aa3.89□□□□□ -1.79
RTN4-214ENST00000486085 RBMY1BA6NDE4 496 aaKnown RBP3.89□□□□□ -1.79
RTN4-214ENST00000486085 A6NDX4 124 aa3.89□□□□□ -1.79
RTN4-214ENST00000486085 RBMY1EA6NEQ0 496 aaKnown RBP3.89□□□□□ -1.79
RTN4-214ENST00000486085 IQCF6A8MYZ5 107 aa3.89□□□□□ -1.79
RTN4-214ENST00000486085 KRTAP4-16G5E9R7 235 aaPredicted RBP3.89□□□□□ -1.79
RTN4-214ENST00000486085 CCRL2O00421 344 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms