RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 PLAC1Q9HBJ0 212 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 DIRC3C9JPN6 131 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 NPIPB3Q92617 1050 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 LINC01587Q99440 93 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 FBXL7Q9UJT9 491 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 TRBV5-3A0A0A0MS03 114 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 FOXI3A8MTJ6 420 aaPredicted RBP9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 HKR1P10072 659 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 RUNX1Q01196 453 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 BSPH1Q075Z2 132 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 STPG2Q8N412 459 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 PRELID3AQ96N28 172 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 VDAC2P45880 294 aaPredicted RBP9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 C1QTNF12Q5T7M4 302 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 VN1R17PQ8TDU5 208 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 TAF15Q92804 592 aaKnown RBP eCLIP9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 ALX4Q9H161 411 aaPredicted RBP9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 NINQ8N4C6 2090 aa9.03□□□□□ -0.96
SRGAP3-207ENST00000485983 RCC1P18754 421 aaPredicted RBP9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 FAM3BP58499 235 aaPredicted RBP9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 C10orf128Q5T292 105 aa9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 SAMD13Q5VXD3 122 aa9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 GPR146Q96CH1 333 aa9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 MRPL32Q9BYC8 188 aaKnown RBP9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 KLK15Q9H2R5 256 aa9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 MRPS18AQ9NVS2 196 aaKnown RBP9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 HSF4Q9ULV5 492 aa9.02□□□□□ -0.96
SRGAP3-207ENST00000485983 M0QZK8 103 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 GGCTO75223 188 aaKnown RBP9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 PRSS23O95084 383 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 HLA-DQA1P01909 254 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 ERGP11308 486 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 MYOD1P15172 320 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 SCARF2Q96GP6 870 aaPredicted RBP9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 LHFPL6Q9Y693 200 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 AHCTF1Q8WYP5 2266 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 IGLV1-36A0A0B4J1U3 117 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 PEAR1Q5VY43 1037 aaPredicted RBP9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 G6PC2Q9NQR9 355 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 TM4SF5O14894 197 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 IGKV1D-33P01593 117 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 IGKV1-33P01594 117 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 TMEM91Q6ZNR0 172 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 HIST1H4GQ99525 98 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 A0A1W2PP11 408 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 TNFRSF9Q07011 255 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 GCSAMLQ5JQS6 135 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 NCMAPQ5T1S8 102 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 ZIC4Q8N9L1 334 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 ZNRF1Q8ND25 227 aa9.02□□□□□ -0.97
SRGAP3-207ENST00000485983 MCM3APO60318 1980 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 LOC102724200A0A096LPH7 203 aaPredicted RBP9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 NEU1Q99519 415 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 COL11A2P13942 1736 aaPredicted RBP9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 LMX1BO60663 402 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 ASIPP42127 132 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 JOSD1Q15040 202 aaPredicted RBP9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 GOLT1AQ6ZVE7 132 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 SIGLEC12Q96PQ1 595 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 ADAMTS7Q9UKP4 1686 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 FAM186AA6NE01 2351 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 IGHV3-49A0A0A0MS15 119 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 CECR9P0C854 216 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 STHQ8IWL8 128 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 TMEM183AQ8IXX5 376 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 FBXL15Q9H469 300 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 PAM16Q9Y3D7 125 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 COL5A3P25940 1745 aaPredicted RBP9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 CDKN1AP38936 164 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 OSR1Q8TAX0 266 aaPredicted RBP9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 C2orf88Q9BSF0 95 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 SEMA5BQ9P283 1151 aa9.01□□□□□ -0.97
SRGAP3-207ENST00000485983 TRBV20OR9-2A0A075B6H5 130 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 NPIPB9F8W1W9 429 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 H3BTX0 84 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 NPIPB7O75200 414 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 MEF2BQ02080 365 aaPredicted RBP9□□□□□ -0.97
SRGAP3-207ENST00000485983 ZNF345Q14585 488 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 GATAD1Q8WUU5 269 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 SPSB4Q96A44 273 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 ZG16O60844 167 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 LEPROTL1O95214 131 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 AMY1AP04745 511 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 ZNF25P17030 456 aaPredicted RBP9□□□□□ -0.97
SRGAP3-207ENST00000485983 OR5P3Q8WZ94 311 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 AQP10Q96PS8 301 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 C21orf62Q9NYP8 219 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 RTTNQ86VV8 2226 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 ZIC3O60481 467 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 TDGF1P13385 188 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 CXCL3P19876 107 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 ARPC1AQ92747 370 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 MIXL1Q9H2W2 232 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 SHANK3Q9BYB0 1731 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 IGHV3-23P01764 117 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 COLCA1Q6ZS62 124 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 UBE2DNLQ8IWF7 75 aa9□□□□□ -0.97
SRGAP3-207ENST00000485983 SELENOHQ8IZQ5 122 aaKnown RBP9□□□□□ -0.97
SRGAP3-207ENST00000485983 NABP2Q9BQ15 211 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms