RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 OR4A8P0C604 315 aa18.72■□□□□ 0.59
CLN5-202ENST00000485938 PAX5Q02548 391 aa18.72■□□□□ 0.59
CLN5-202ENST00000485938 BTF3L4Q96K17 158 aa18.72■□□□□ 0.59
CLN5-202ENST00000485938 PXMP4Q9Y6I8 212 aa18.72■□□□□ 0.59
CLN5-202ENST00000485938 A0A1W2PPV4 95 aa18.72■□□□□ 0.59
CLN5-202ENST00000485938 IQCJQ1A5X6 159 aa18.72■□□□□ 0.59
CLN5-202ENST00000485938 WDR82Q6UXN9 313 aa18.72■□□□□ 0.59
CLN5-202ENST00000485938 GMPPAQ96IJ6 420 aaPredicted RBP18.72■□□□□ 0.59
CLN5-202ENST00000485938 CXXC4Q9H2H0 198 aa18.72■□□□□ 0.59
CLN5-202ENST00000485938 PGPEP1LA6NFU8 196 aa18.71■□□□□ 0.59
CLN5-202ENST00000485938 SOX15O60248 233 aa18.71■□□□□ 0.59
CLN5-202ENST00000485938 PRAMEF6Q5VXH4 476 aa18.71■□□□□ 0.59
CLN5-202ENST00000485938 PATZ1Q9HBE1 687 aaKnown RBP18.71■□□□□ 0.59
CLN5-202ENST00000485938 IL17BQ9UHF5 180 aa18.71■□□□□ 0.59
CLN5-202ENST00000485938 RBFOX2O43251 390 aaKnown RBP eCLIP18.71■□□□□ 0.58
CLN5-202ENST00000485938 TNFSF15O95150 251 aa18.71■□□□□ 0.58
CLN5-202ENST00000485938 TRIP6Q15654 476 aaKnown RBP18.71■□□□□ 0.58
CLN5-202ENST00000485938 SFRP2Q96HF1 295 aa18.71■□□□□ 0.58
CLN5-202ENST00000485938 WFIKKN1Q96NZ8 548 aa18.71■□□□□ 0.58
CLN5-202ENST00000485938 TRBV20OR9-2A0A075B6H5 130 aa18.7■□□□□ 0.58
CLN5-202ENST00000485938 C15orf65H3BRN8 121 aa18.7■□□□□ 0.58
CLN5-202ENST00000485938 IFNL4K9M1U5 179 aa18.7■□□□□ 0.58
CLN5-202ENST00000485938 MPDU1O75352 247 aa18.7■□□□□ 0.58
CLN5-202ENST00000485938 SELLP14151 372 aa18.7■□□□□ 0.58
CLN5-202ENST00000485938 OPRK1P41145 380 aa18.7■□□□□ 0.58
CLN5-202ENST00000485938 USF2Q15853 346 aaPredicted RBP18.7■□□□□ 0.58
CLN5-202ENST00000485938 DCTN5Q9BTE1 182 aa18.7■□□□□ 0.58
CLN5-202ENST00000485938 PROP1O75360 226 aa18.69■□□□□ 0.58
CLN5-202ENST00000485938 DUTP33316 252 aaKnown RBP18.69■□□□□ 0.58
CLN5-202ENST00000485938 INO80CQ6PI98 192 aaPredicted RBP18.69■□□□□ 0.58
CLN5-202ENST00000485938 TREML4Q6UXN2 200 aa18.69■□□□□ 0.58
CLN5-202ENST00000485938 ELOVL5Q9NYP7 299 aa18.69■□□□□ 0.58
CLN5-202ENST00000485938 ARL14EPLP0DKL9 152 aa18.69■□□□□ 0.58
CLN5-202ENST00000485938 CD46P15529 392 aa18.69■□□□□ 0.58
CLN5-202ENST00000485938 HTD2P86397 168 aa18.69■□□□□ 0.58
CLN5-202ENST00000485938 TMEM256Q8N2U0 113 aa18.69■□□□□ 0.58
CLN5-202ENST00000485938 SGMS2Q8NHU3 365 aa18.69■□□□□ 0.58
CLN5-202ENST00000485938 FAM90A9PA6NNJ1 464 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 SPCS3P61009 180 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 TMEM164Q5U3C3 297 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 A0A1B0GUS0 222 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 PRSS46E5RG02 174 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 RRHO14718 337 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 SPINT2O43291 252 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 FCGR3BO75015 233 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 Q8TCH9 128 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 MGST2Q99735 147 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 TXNDC17Q9BRA2 123 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 FKBP11Q9NYL4 201 aa18.68■□□□□ 0.58
CLN5-202ENST00000485938 HCFC1P51610 2035 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 ADH4P08319 380 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 STAG3L2P0CL84 134 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 STAG3L3P0CL85 134 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 GCH1P30793 250 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 GPR12P47775 334 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 SOX8P57073 446 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 RAB4BP61018 213 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 RPP30P78346 268 aaKnown RBP18.67■□□□□ 0.58
CLN5-202ENST00000485938 SMIM21Q3B7S5 101 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 PRAMEF5Q5TYX0 476 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 TEX38Q6PEX7 206 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 GCNT2Q8N0V5 402 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 HPRT1P00492 218 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 VDAC2P45880 294 aaPredicted RBP18.67■□□□□ 0.58
CLN5-202ENST00000485938 TMPRSS3P57727 454 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 LTC4SQ16873 150 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 TGIF2LXQ8IUE1 241 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 GGTLC1Q9BX51 225 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 MS4A5Q9H3V2 200 aa18.67■□□□□ 0.58
CLN5-202ENST00000485938 MDFIC2A0A1B0GVS7 189 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 EREGO14944 169 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 NUPR1O60356 82 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 ZNF883P0CG24 379 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 SDSLQ96GA7 329 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 ZDHHC11Q9H8X9 412 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 HEYLQ9NQ87 328 aaPredicted RBP18.66■□□□□ 0.58
CLN5-202ENST00000485938 BDP1A6H8Y1 2624 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 URB1O60287 2271 aaKnown RBP18.66■□□□□ 0.58
CLN5-202ENST00000485938 ARG2P78540 354 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 MIC13Q5XKP0 118 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 TRAT1Q6PIZ9 186 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 TCF23Q7RTU1 214 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 CD177Q8N6Q3 437 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 OR4A16Q8NH70 328 aa18.66■□□□□ 0.58
CLN5-202ENST00000485938 SCO2A0A1W2PP80 73 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 AGFG2O95081 481 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 SCGB1D1O95968 90 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 CXorf1O96002 111 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 PDLIM3Q53GG5 364 aaPredicted RBP18.65■□□□□ 0.58
CLN5-202ENST00000485938 OR52E5Q8NH55 327 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 TMEM204Q9BSN7 226 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 TIMM8AO60220 97 aaPredicted RBP18.65■□□□□ 0.58
CLN5-202ENST00000485938 YPEL3P61236 119 aaPredicted RBP18.65■□□□□ 0.58
CLN5-202ENST00000485938 Q6ZT83 130 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 FER1L6-AS2Q96M78 137 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 CHODLQ9H9P2 273 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 MSL2Q9HCI7 577 aa18.65■□□□□ 0.58
CLN5-202ENST00000485938 GFRA3O60609 400 aa18.64■□□□□ 0.57
CLN5-202ENST00000485938 IGKV3-15P01624 115 aa18.64■□□□□ 0.57
CLN5-202ENST00000485938 KITLGP21583 273 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms