RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 OR4C45A6NMZ5 311 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 MCRIP1C9JLW8 97 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 TSPAN4O14817 238 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 CCDC22O60826 627 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 SC5DO75845 299 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 TOMM40O96008 361 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 IGLV2-23P01705 113 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 CD74P04233 296 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 ALPLP05186 524 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 CRYGBP07316 175 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 RBMY1CP0DJD4 496 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 C8orf88P0DMB2 117 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 CRISP1P54107 249 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 EFNB1P98172 346 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 C15orf32Q32M92 178 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 OR4A47Q6IF82 309 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 GID4Q8IVV7 300 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 ZNF383Q8NA42 475 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 NECAP1Q8NC96 275 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 OR5D14Q8NGL3 314 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 OR13C5Q8NGS8 318 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 TMEM163Q8TC26 289 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 CMTM5Q96DZ9 223 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 PELI1Q96FA3 418 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 ABHD14BQ96IU4 210 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 PHB2Q99623 299 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 PRRG3Q9BZD7 231 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 METTL9Q9H1A3 318 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 SPACA1Q9HBV2 294 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 KCNIP1Q9NZI2 227 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 WARS2Q9UGM6 360 aaKnown RBP4.73□□□□□ -1.65
SMC4-217ENST00000485867 RPL36Q9Y3U8 105 aaKnown RBP4.73□□□□□ -1.65
SMC4-217ENST00000485867 VPS13BQ7Z7G8 4022 aa4.73□□□□□ -1.65
SMC4-217ENST00000485867 CA11O75493 328 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 OR2J3O76001 311 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 CST1P01037 141 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 IFNA10P01566 189 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 HTR1AP08908 422 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 T-ENOLP0DO92 83 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 ANXA8P13928 327 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 RAB3AP20336 220 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 PRKACGP22612 351 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 ARL3P36405 182 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 CCR9P51686 369 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 TIRAPP58753 221 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 RAB32Q13637 225 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 PTGES3Q15185 160 aaKnown RBP4.72□□□□□ -1.65
SMC4-217ENST00000485867 FAM106AQ4KMX7 169 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 FAM98BQ52LJ0 330 aaKnown RBP4.72□□□□□ -1.65
SMC4-217ENST00000485867 SLC25A30Q5SVS4 291 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 RAB12Q6IQ22 244 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 UNQ9165/PRO28630Q6UXU0 137 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 PDPNQ86YL7 162 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 UBE2DNLQ8IWF7 75 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 DRAXINQ8NBI3 349 aaPredicted RBP4.72□□□□□ -1.65
SMC4-217ENST00000485867 SETD9Q8NE22 299 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 MRPL30Q8TCC3 161 aaKnown RBP4.72□□□□□ -1.65
SMC4-217ENST00000485867 MARC2Q969Z3 335 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 GALMQ96C23 342 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 IL4I1Q96RQ9 567 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 ELAC2Q9BQ52 826 aaKnown RBP4.72□□□□□ -1.65
SMC4-217ENST00000485867 NDUFAF3Q9BU61 184 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 SCRT1Q9BWW7 348 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 C6orf62Q9GZU0 229 aaPredicted RBP4.72□□□□□ -1.65
SMC4-217ENST00000485867 C5orf66Q9H5L9 145 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 EXOSC1Q9Y3B2 195 aaKnown RBP4.72□□□□□ -1.65
SMC4-217ENST00000485867 GMPPBQ9Y5P6 360 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
SMC4-217ENST00000485867 DEFB131BA0A096LNP1 70 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 IGHV4-28A0A0C4DH34 117 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 HMGB1P1B2RPK0 211 aaPredicted RBP4.71□□□□□ -1.66
SMC4-217ENST00000485867 GPX5O75715 221 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 CA1P00915 261 aaPredicted RBP4.71□□□□□ -1.66
SMC4-217ENST00000485867 IGHV3-23P01764 117 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 APOA2P02652 100 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 PSG1P11464 419 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 GTF2F2P13984 249 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 PRDX6P30041 224 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 MED21Q13503 144 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 TMEM187Q14656 261 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 HMGN3Q15651 99 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 SLC22A6Q4U2R8 563 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 ZNF585BQ52M93 769 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 C12orf73Q69YU5 71 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 CLEC19AQ6UXS0 136 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 ZNF367Q7RTV3 350 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 SPATA12Q7Z6I5 190 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 APRG1Q8IVJ8 170 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 SRSF12Q8WXF0 261 aaKnown RBP4.71□□□□□ -1.66
SMC4-217ENST00000485867 ASB9Q96DX5 294 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 AGMATQ9BSE5 352 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 CHRDL1Q9BU40 450 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 PAK1IP1Q9NWT1 392 aaPredicted RBP4.71□□□□□ -1.66
SMC4-217ENST00000485867 TAS2R4Q9NYW5 299 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 MRPL27Q9P0M9 148 aaKnown RBP4.71□□□□□ -1.66
SMC4-217ENST00000485867 STEAP1Q9UHE8 339 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 PEX16Q9Y5Y5 336 aa4.71□□□□□ -1.66
SMC4-217ENST00000485867 OR4C46A6NHA9 309 aa4.7□□□□□ -1.66
SMC4-217ENST00000485867 ITGB1BP1O14713 200 aa4.7□□□□□ -1.66
SMC4-217ENST00000485867 ZNF780AO75290 641 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms