RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 SHOXO15266 292 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 ATG12O94817 140 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 P0C879 139 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 RAP2BP61225 183 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 KRTAP1-1Q07627 177 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 TCTE3Q8IZS6 198 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 DMBX1Q8NFW5 382 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 OR4C13Q8NGP0 309 aa12.97□□□□□ -0.33
ZNF248-206ENST00000485560 SOX21Q9Y651 276 aaPredicted RBP12.97□□□□□ -0.33
ZNF248-206ENST00000485560 HRASP01112 189 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 RPS16P62249 146 aaKnown RBP12.96□□□□□ -0.33
ZNF248-206ENST00000485560 IL15RAQ13261 267 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 Q5BKY6 102 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 H2BFWTQ7Z2G1 175 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 FAM219AQ8IW50 185 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.33
ZNF248-206ENST00000485560 OR2T35Q8NGX2 323 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 OSR1Q8TAX0 266 aaPredicted RBP12.96□□□□□ -0.33
ZNF248-206ENST00000485560 RHOVQ96L33 236 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 HARBI1Q96MB7 349 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 NMES1Q9C002 83 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 SVEP1Q4LDE5 3571 aa12.96□□□□□ -0.33
ZNF248-206ENST00000485560 A0A0U1RQK1 487 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 VENTXO95231 258 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 CD24P25063 80 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 CD1BP29016 333 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 ERVK-16P61578 105 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 ASB13Q8WXK3 278 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 SPIN2AQ99865 258 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 SPIN2BQ9BPZ2 258 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 MS4A7Q9GZW8 240 aaPredicted RBP12.96□□□□□ -0.34
ZNF248-206ENST00000485560 CACNG5Q9UF02 275 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 ACANP16112 2415 aa12.96□□□□□ -0.34
ZNF248-206ENST00000485560 TNCP24821 2201 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 A0A1B0GU03 582 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 G3V3Q6 166 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 FSHBP01225 129 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 CYCSP99999 105 aaKnown RBP12.95□□□□□ -0.34
ZNF248-206ENST00000485560 POU2AF1Q16633 256 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 LRRC37A5PQ49AS3 106 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 FBLN7Q53RD9 439 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
ZNF248-206ENST00000485560 PPP1R1CQ8WVI7 109 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 TMEM140Q9NV12 185 aa12.95□□□□□ -0.34
ZNF248-206ENST00000485560 IGKV1D-33P01593 117 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 IGKV1-33P01594 117 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 IGLV2-23P01705 113 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 SNRNP70P08621 437 aaKnown RBP12.94□□□□□ -0.34
ZNF248-206ENST00000485560 OR9G9P0C7N8 305 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 SLC25A6P12236 298 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 SMCO1Q147U7 214 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 OR4A47Q6IF82 309 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 OR4D5Q8NGN0 318 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 NANPQ8TBE9 248 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 NSG2Q9Y328 171 aa12.94□□□□□ -0.34
ZNF248-206ENST00000485560 TRAV3A0A0B4J244 114 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 BOLA2-SMG1P6H3BVE0 249 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 CD5LO43866 347 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 PITX3O75364 302 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 NXPH3O95157 252 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 SAA1P0DJI8 122 aaPredicted RBP12.93□□□□□ -0.34
ZNF248-206ENST00000485560 CNTFRP26992 372 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 FAM120AOSQ5T036 256 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 NUP50Q9UKX7 468 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 TLN2Q9Y4G6 2542 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 PLXNB1O43157 2135 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 TRAV14DV4A0A0A6YYC5 116 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 ARHGDIBP52566 201 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 RAB32Q13637 225 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 HES1Q14469 280 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 HNF4GQ14541 408 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 CXorf66Q5JRM2 361 aaPredicted RBP12.93□□□□□ -0.34
ZNF248-206ENST00000485560 OR1S1Q8NH92 325 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 EAF1Q96JC9 268 aaPredicted RBP12.93□□□□□ -0.34
ZNF248-206ENST00000485560 AIFM2Q9BRQ8 373 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 MEGF9Q9H1U4 602 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 FAM96BQ9Y3D0 163 aa12.93□□□□□ -0.34
ZNF248-206ENST00000485560 MOSP00540 346 aa12.92□□□□□ -0.34
ZNF248-206ENST00000485560 MBPP02686 304 aaPredicted RBP12.92□□□□□ -0.34
ZNF248-206ENST00000485560 IL6RP08887 468 aaPredicted RBP12.92□□□□□ -0.34
ZNF248-206ENST00000485560 BRS3P32247 399 aa12.92□□□□□ -0.34
ZNF248-206ENST00000485560 LGALS7P47929 136 aa12.92□□□□□ -0.34
ZNF248-206ENST00000485560 BPIFB3P59826 476 aa12.92□□□□□ -0.34
ZNF248-206ENST00000485560 RELBQ01201 579 aa12.92□□□□□ -0.34
ZNF248-206ENST00000485560 FOXRED2Q8IWF2 684 aa12.92□□□□□ -0.34
ZNF248-206ENST00000485560 PUSL1Q8N0Z8 303 aaKnown RBP12.92□□□□□ -0.34
ZNF248-206ENST00000485560 BCL6BQ8N143 479 aaPredicted RBP12.92□□□□□ -0.34
ZNF248-206ENST00000485560 COA4Q9NYJ1 87 aa12.92□□□□□ -0.34
ZNF248-206ENST00000485560 SLC25A17O43808 307 aa12.91□□□□□ -0.34
ZNF248-206ENST00000485560 MPC2O95563 127 aa12.91□□□□□ -0.34
ZNF248-206ENST00000485560 C1QBP02746 253 aa12.91□□□□□ -0.34
ZNF248-206ENST00000485560 HNRNPCP07910 306 aaKnown RBP eCLIP12.91□□□□□ -0.345e-6■■■■□ 22
ZNF248-206ENST00000485560 PSMB6P28072 239 aa12.91□□□□□ -0.34
ZNF248-206ENST00000485560 NKX2-1P43699 371 aaPredicted RBP12.91□□□□□ -0.34
ZNF248-206ENST00000485560 OR2B8PP59922 312 aa12.91□□□□□ -0.34
ZNF248-206ENST00000485560 S100A10P60903 97 aa12.91□□□□□ -0.34
ZNF248-206ENST00000485560 EBI3Q14213 229 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms