RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 METTL21EPA6NDL7 271 aa14.57□□□□□ -0.08
COL27A1-205ENST00000485397 IFNA6P05013 189 aa14.57□□□□□ -0.08
COL27A1-205ENST00000485397 MYL9P24844 172 aa14.57□□□□□ -0.08
COL27A1-205ENST00000485397 TBCEQ15813 527 aaPredicted RBP14.57□□□□□ -0.08
COL27A1-205ENST00000485397 ZNF367Q7RTV3 350 aa14.57□□□□□ -0.08
COL27A1-205ENST00000485397 DCUN1D5Q9BTE7 237 aa14.57□□□□□ -0.08
COL27A1-205ENST00000485397 ATG5Q9H1Y0 275 aa14.57□□□□□ -0.08
COL27A1-205ENST00000485397 PLEKHA3Q9HB20 300 aa14.57□□□□□ -0.08
COL27A1-205ENST00000485397 FAM223BA6NKX1 122 aa14.56□□□□□ -0.08
COL27A1-205ENST00000485397 FCGR3BO75015 233 aa14.56□□□□□ -0.08
COL27A1-205ENST00000485397 RAB3BP20337 219 aa14.56□□□□□ -0.08
COL27A1-205ENST00000485397 RPL30P62888 115 aaKnown RBP14.56□□□□□ -0.08
COL27A1-205ENST00000485397 CDK10Q15131 360 aa14.56□□□□□ -0.08
COL27A1-205ENST00000485397 CD300EQ496F6 205 aaPredicted RBP14.56□□□□□ -0.08
COL27A1-205ENST00000485397 OR2B11Q5JQS5 317 aa14.56□□□□□ -0.08
COL27A1-205ENST00000485397 NR2C2APQ86WQ0 139 aa14.56□□□□□ -0.08
COL27A1-205ENST00000485397 FAM223AQ8IWN6 122 aa14.56□□□□□ -0.08
COL27A1-205ENST00000485397 TTC9CQ8N5M4 171 aa14.56□□□□□ -0.08
COL27A1-205ENST00000485397 CSMD3Q7Z407 3707 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 LYSTQ99698 3801 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.55□□□□□ -0.08
COL27A1-205ENST00000485397 TRDV1A0A1B0GX56 115 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 SMIM30A4D0T7 59 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 HMX3A6NHT5 357 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 AIREO43918 545 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 OR2J3O76001 311 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 ACTL6BO94805 426 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 EDN2P20800 178 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 NFYAP23511 347 aaPredicted RBP14.55□□□□□ -0.08
COL27A1-205ENST00000485397 DTYMKP23919 212 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 CD81P60033 236 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 CDNFQ49AH0 187 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 LINC00322Q6ZN03 302 aaPredicted RBP14.55□□□□□ -0.08
COL27A1-205ENST00000485397 C19orf35Q6ZS72 473 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 MMD2Q8IY49 270 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 ZNF645Q8N7E2 425 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 OR2K2Q8NGT1 345 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 SPIN2AQ99865 258 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 SPIN2BQ9BPZ2 258 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 CENPOQ9BU64 300 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 ST6GALNAC5Q9BVH7 336 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 NDUFB11Q9NX14 153 aa14.55□□□□□ -0.08
COL27A1-205ENST00000485397 ZNF785A8K8V0 405 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 PPP5D1E7EU14 171 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 TUSC2O75896 110 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 CD7P09564 240 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 C22orf42Q6IC83 251 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 KCTD9Q7L273 389 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 VKORC1L1Q8N0U8 176 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 FAM110AQ9BQ89 295 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 NEURL2Q9BR09 285 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 HIPK2Q9H2X6 1198 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 RBMX2Q9Y388 322 aaKnown RBP14.54□□□□□ -0.08
COL27A1-205ENST00000485397 OR2W1Q9Y3N9 320 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 DMRT1Q9Y5R6 373 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 CEPT1Q9Y6K0 416 aa14.54□□□□□ -0.08
COL27A1-205ENST00000485397 IGKV1D-13A0A0B4J2D9 117 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 ERICH4A6NGS2 130 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 CREBL2O60519 120 aaPredicted RBP14.53□□□□□ -0.08
COL27A1-205ENST00000485397 IGLV2-14P01704 120 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 HLA-AP01891 365 aaKnown RBP14.53□□□□□ -0.08
COL27A1-205ENST00000485397 HLA-DQB1P01920 261 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 IGKV1-13P0DP09 117 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 C15orf32Q32M92 178 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 DEFB125Q8N687 156 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 NECAP1Q8NC96 275 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 DYNLRB2Q8TF09 96 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 CNBD2Q96M20 576 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 OR51E2Q9H255 320 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 PRELID3BQ9Y3B1 194 aa14.53□□□□□ -0.08
COL27A1-205ENST00000485397 TEX22C9J3V5 150 aa14.52□□□□□ -0.09
COL27A1-205ENST00000485397 TPPPO94811 219 aa14.52□□□□□ -0.09
COL27A1-205ENST00000485397 ARL6IP1Q15041 203 aa14.52□□□□□ -0.09
COL27A1-205ENST00000485397 DEFB114Q30KQ6 69 aa14.52□□□□□ -0.09
COL27A1-205ENST00000485397 HACD4Q5VWC8 232 aa14.52□□□□□ -0.09
COL27A1-205ENST00000485397 NUDCD2Q8WVJ2 157 aa14.52□□□□□ -0.09
COL27A1-205ENST00000485397 WFDC10AQ9H1F0 79 aa14.52□□□□□ -0.09
COL27A1-205ENST00000485397 SLC2A8Q9NY64 477 aa14.52□□□□□ -0.09
COL27A1-205ENST00000485397 BIRC6Q9NR09 4857 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 RBMY1BA6NDE4 496 aaKnown RBP14.51□□□□□ -0.09
COL27A1-205ENST00000485397 RBMY1EA6NEQ0 496 aaKnown RBP14.51□□□□□ -0.09
COL27A1-205ENST00000485397 C2orf70A6NJV1 201 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 E7EUB6 86 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 OR2C1O95371 312 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 IL6RP08887 468 aaPredicted RBP14.51□□□□□ -0.09
COL27A1-205ENST00000485397 CTXN2P0C2S0 81 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 RBMY1DP0C7P1 496 aaKnown RBP14.51□□□□□ -0.09
COL27A1-205ENST00000485397 CD36P16671 472 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 SLC25A42Q86VD7 318 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 KCTD12Q96CX2 325 aaKnown RBP14.51□□□□□ -0.09
COL27A1-205ENST00000485397 FYTTD1Q96QD9 318 aaKnown RBP14.51□□□□□ -0.09
COL27A1-205ENST00000485397 FBXL7Q9UJT9 491 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 ZNF257Q9Y2Q1 563 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 MRPS7Q9Y2R9 242 aaKnown RBP14.51□□□□□ -0.09
COL27A1-205ENST00000485397 SELENOKQ9Y6D0 94 aa14.51□□□□□ -0.09
COL27A1-205ENST00000485397 HYDINQ4G0P3 5121 aa14.5□□□□□ -0.09
COL27A1-205ENST00000485397 A0A1B0GW64 132 aa14.5□□□□□ -0.09
COL27A1-205ENST00000485397 TMEM235A6NFC5 223 aa14.5□□□□□ -0.09
COL27A1-205ENST00000485397 GGCTO75223 188 aaKnown RBP14.5□□□□□ -0.09
COL27A1-205ENST00000485397 NDUFB8O95169 186 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms