RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 AKIRIN2Q53H80 203 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 RNASE10Q5GAN6 216 aaKnown RBP13.93□□□□□ -0.18
SREBF1-213ENST00000485080 AADACL3Q5VUY0 350 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 HIST2H2BDQ6DRA6 164 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 LHFPL1Q86WI0 220 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 CMTM1Q8IZ96 169 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 MYOZ3Q8TDC0 251 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 AIFM2Q9BRQ8 373 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 TPSG1Q9NRR2 321 aa13.93□□□□□ -0.18
SREBF1-213ENST00000485080 FABP12A6NFH5 140 aa13.92□□□□□ -0.18
SREBF1-213ENST00000485080 GPR31O00270 319 aa13.92□□□□□ -0.18
SREBF1-213ENST00000485080 PTBP1P26599 531 aaKnown RBP eCLIP13.92□□□□□ -0.18
SREBF1-213ENST00000485080 RPL23AP62750 156 aaKnown RBP13.92□□□□□ -0.18
SREBF1-213ENST00000485080 PRSS8Q16651 343 aa13.92□□□□□ -0.18
SREBF1-213ENST00000485080 TMEM68Q96MH6 324 aa13.92□□□□□ -0.18
SREBF1-213ENST00000485080 RSRP1Q9BUV0 290 aa13.92□□□□□ -0.18
SREBF1-213ENST00000485080 TINAGL1Q9GZM7 467 aaPredicted RBP13.92□□□□□ -0.18
SREBF1-213ENST00000485080 FAM212BQ9NTI7 297 aaPredicted RBP13.92□□□□□ -0.18
SREBF1-213ENST00000485080 FBXO7Q9Y3I1 522 aa13.92□□□□□ -0.18
SREBF1-213ENST00000485080 G3V318 75 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 M0QYG6 137 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 ARPC1BO15143 372 aaKnown RBP13.91□□□□□ -0.18
SREBF1-213ENST00000485080 TNFSF12O43508 249 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 CREBL2O60519 120 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-213ENST00000485080 PGLYRP1O75594 196 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-213ENST00000485080 HRASP01112 189 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 IFNA6P05013 189 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 PJVKQ0ZLH3 352 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 FXYD3Q14802 87 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 POU2AF1Q16633 256 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 RNASE12Q5GAN4 147 aaKnown RBP13.91□□□□□ -0.18
SREBF1-213ENST00000485080 CXorf66Q5JRM2 361 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-213ENST00000485080 STEAP1BQ6NZ63 245 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 SLC38A6Q8IZM9 456 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 SPAG16Q8N0X2 631 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 PUSL1Q8N0Z8 303 aaKnown RBP13.91□□□□□ -0.18
SREBF1-213ENST00000485080 CADM3Q8N126 398 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 VSTM2AQ8TAG5 236 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 ARPC1AQ92747 370 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 R3HDM4Q96D70 268 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 CLCC1Q96S66 551 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 GPHA2Q96T91 129 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 WSB1Q9Y6I7 421 aa13.91□□□□□ -0.18
SREBF1-213ENST00000485080 DPPA5A6NC42 116 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 RAMP3O60896 148 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 HPRT1P00492 218 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 SAA1P0DJI8 122 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-213ENST00000485080 S100A5P33763 92 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 ETV6P41212 452 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 CDX1P47902 265 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-213ENST00000485080 TAS2R31P59538 309 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 MEF2DQ14814 521 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 OR2B11Q5JQS5 317 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 CCDC190Q86UF4 302 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 MMD2Q8IY49 270 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 POC5Q8NA72 575 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 ZNF486Q96H40 463 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-213ENST00000485080 RHOVQ96L33 236 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 PLEKHA2Q9HB19 425 aa13.9□□□□□ -0.18
SREBF1-213ENST00000485080 FOXA2Q9Y261 457 aaPredicted RBP13.9□□□□□ -0.18
SREBF1-213ENST00000485080 OR2A4O95047 310 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 BRI3O95415 125 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 RAB3DO95716 219 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 RPLP1P05386 114 aaKnown RBP13.89□□□□□ -0.19
SREBF1-213ENST00000485080 FGF2P09038 288 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 F2RP25116 425 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 S100GP29377 79 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 OR5M8Q8NGP6 311 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 TERB2Q8NHR7 220 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 FAM110DQ8TAY7 271 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-213ENST00000485080 TMEM167AQ8TBQ9 72 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 OR2A7Q96R45 310 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 COMMD9Q9P000 198 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 V9GYH0 126 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 MEGF8Q7Z7M0 2845 aa13.89□□□□□ -0.19
SREBF1-213ENST00000485080 ANKRD20A5PA0PJZ0 165 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 SOX15O60248 233 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 CNIH1O95406 144 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 IL6RP08887 468 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-213ENST00000485080 ZNF735P0CB33 412 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 NQO2P16083 231 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 RND3P61587 244 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 KIAA0141Q14154 515 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-213ENST00000485080 FOXB2Q5VYV0 432 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 ZNF695Q8IW36 515 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 LFNGQ8NES3 379 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 WFDC9Q8NEX5 89 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 OR4D10Q8NGI6 311 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 OR51H1Q8NH63 302 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 OR4A5Q8NH83 315 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 ZNF430Q9H8G1 570 aaPredicted RBP13.88□□□□□ -0.19
SREBF1-213ENST00000485080 BET1LQ9NYM9 111 aa13.88□□□□□ -0.19
SREBF1-213ENST00000485080 DNAH3Q8TD57 4116 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 A0A1W2PRX2 142 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 KBTBD11O94819 623 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 RLN1P04808 185 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 AKAIN1P0CW23 69 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 MAS1LP35410 378 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 ECI1P42126 302 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 RAB9AP51151 201 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms