RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 TMEM255BQ8WV15 326 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 PHLDA1Q8WV24 401 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-205ENST00000485055 TSPAN32Q96QS1 320 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 SMR3AQ99954 134 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 GINS3Q9BRX5 216 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 IDI2-AS1Q9NZ38 188 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 GNG8Q9UK08 70 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 WSB1Q9Y6I7 421 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 NSD1Q96L73 2696 aaPredicted RBP4.26□□□□□ -1.73
CCDC39-205ENST00000485055 ADGRG4Q8IZF6 3080 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 NF1P21359 2839 aa4.26□□□□□ -1.73
CCDC39-205ENST00000485055 A0A1W2PRE2 83 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 MAP1LC3B2A6NCE7 125 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 NCBP2LA6PVI3 153 aaKnown RBP4.25□□□□□ -1.73
CCDC39-205ENST00000485055 IQCF6A8MYZ5 107 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 INAFM1C9JVW0 142 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 GYG2O15488 501 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 NDUFB2O95178 105 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 LMO1P25800 156 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 KLF3P57682 345 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-205ENST00000485055 FXYD6P3P58550 94 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 KIAA0141Q14154 515 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-205ENST00000485055 LCN8Q6JVE9 175 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 PLET1Q6UQ28 207 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 Q6ZNX1 250 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF525Q8N782 197 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 TEX45Q8NA69 505 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 OR2T4Q8NH00 348 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 FGGYQ96C11 551 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 MAP1LC3BQ9GZQ8 125 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 SEC61A2Q9H9S3 476 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 A0A0A6YYD4 124 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 IGHV4-61A0A0C4DH41 118 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 CPSF4LA6NMK7 179 aaKnown RBP4.25□□□□□ -1.73
CCDC39-205ENST00000485055 FOXI3A8MTJ6 420 aaPredicted RBP4.25□□□□□ -1.73
CCDC39-205ENST00000485055 IGHV2-5P01817 119 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 RBMY1CP0DJD4 496 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 RHOBP62745 196 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 HOXC5Q00444 222 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 PLP2Q04941 152 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 RBMS2Q15434 407 aaKnown RBP4.25□□□□□ -1.73
CCDC39-205ENST00000485055 MICAQ29983 383 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF718Q3SXZ3 478 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 SPATA31B1PQ5VZV4 182 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 NEXN-AS1Q8NBZ9 246 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 OR4K5Q8NGD3 323 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 PYURFQ96I23 114 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 REEP1Q9H902 201 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 ESM1Q9NQ30 184 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 MED29Q9NX70 200 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 ANK2Q01484 3957 aa4.25□□□□□ -1.73
CCDC39-205ENST00000485055 FAM240AA0A1B0GVK7 77 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 F6UB75 175 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 SMKR1H3BMG3 65 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 SLC22A1O15245 554 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 SYNGR1O43759 233 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 FKBP6O75344 327 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 ATG12O94817 140 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 PPP1R3DO95685 299 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 OR13C7P0DN81 318 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 SAA4P35542 130 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 CEACAM21Q3KPI0 293 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 MESTQ5EB52 335 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 RNASE10Q5GAN6 216 aaKnown RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 TCTEX1D4Q5JR98 221 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 LRRC28Q86X40 367 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 OSR2Q8N2R0 312 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 OR2G2Q8NGZ5 317 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 OR13C6PQ8NH95 151 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 PFN4Q8NHR9 129 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 DIRAS2Q96HU8 199 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 BTF3L4Q96K17 158 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 MARVELD1Q9BSK0 173 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 PRSS22Q9GZN4 317 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 EXOSC4Q9NPD3 245 aaKnown RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 RFNGQ9Y644 331 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 LOC102724200A0A096LPH7 203 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 A0A0G2JND7 137 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF816-ZNF321PA0A0X1KG74 233 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 PRR32B1ATL7 298 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 IGHV3-9P01782 118 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 ADRA2AP08913 450 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 APLNRP35414 380 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 EIF2B1Q14232 305 aaKnown RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 TMEM187Q14656 261 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 PRSS8Q16651 343 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 PABPC1L2AQ5JQF8 200 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 TMEM255AQ5JRV8 349 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 SVOPLQ8N434 492 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 SPICQ8N5J4 248 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 OR4K15Q8NH41 348 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 THAP6Q8TBB0 222 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 ASB13Q8WXK3 278 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 RCN3Q96D15 328 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 POU2F3Q9UKI9 436 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 ZNF256Q9Y2P7 627 aaPredicted RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 HEATR1Q9H583 2144 aaKnown RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 CSMD2Q7Z408 3487 aa4.24□□□□□ -1.73
CCDC39-205ENST00000485055 HMGB3O15347 200 aaKnown RBP4.24□□□□□ -1.73
CCDC39-205ENST00000485055 FABP7O15540 132 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms