RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 PAX9P55771 341 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 DLX6P56179 175 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ATP5IP56385 69 aaPredicted RBP4.43□□□□□ -1.7
COL17A1-206ENST00000483876 UBE2KP61086 200 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 POLR2GP62487 172 aaKnown RBP eCLIP4.43□□□□□ -1.7
COL17A1-206ENST00000483876 POU2AF1Q16633 256 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 FBLN7Q53RD9 439 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 NCR3LG1Q68D85 454 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ALKAL2Q6UX46 152 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 LYPD2Q6UXB3 125 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF841Q6ZN19 808 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 C1orf122Q6ZSJ8 110 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 TCF23Q7RTU1 214 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 H2BFWTQ7Z2G1 175 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF429Q86V71 674 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 FOXRED2Q8IWF2 684 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ODF3L1Q8IXM7 274 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 PUSL1Q8N0Z8 303 aaKnown RBP4.43□□□□□ -1.7
COL17A1-206ENST00000483876 STPG2Q8N412 459 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 C11orf42Q8N5U0 333 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 C3orf56Q8N813 242 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 MAPK1IP1LQ8NDC0 245 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 LY6G5BQ8NDX9 201 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 UBALD1Q8TB05 177 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM186Q96B77 213 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 PERPQ96FX8 193 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 C5orf30Q96GV9 206 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 CIB3Q96Q77 187 aaPredicted RBP4.43□□□□□ -1.7
COL17A1-206ENST00000483876 GPHA2Q96T91 129 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF251Q9BRH9 671 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 HIPK2Q9H2X6 1198 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 CHODLQ9H9P2 273 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 ZC4H2Q9NQZ6 224 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 C19orf12Q9NSK7 152 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 CACNG5Q9UF02 275 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 TRRAPQ9Y4A5 3859 aa4.43□□□□□ -1.7
COL17A1-206ENST00000483876 HRNRQ86YZ3 2850 aaPredicted RBP4.43□□□□□ -1.7
COL17A1-206ENST00000483876 HYDINQ4G0P3 5121 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 A0A0G2JRQ6 117 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 FAM24AA6NFZ4 105 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 MARCH11A6NNE9 402 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 LEUTXA8MZ59 168 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 J3QR06 171 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 M0R1X1 148 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 OVOL3O00110 214 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 TXNL1O43396 289 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 RAMP3O60896 148 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 FCN3O75636 299 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 DFFBO76075 338 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 VENTXO95231 258 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 TMEM50AO95807 157 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 SCGB1D2O95969 90 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 HRASP01112 189 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 KRASP01116 189 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 SOD3P08294 240 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 OR8U8P0C7N1 319 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 SPP1P10451 314 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 SELLP14151 372 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 MC5RP33032 325 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 SULT1A2P50226 295 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 EFNA4P52798 201 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 PRRX1P54821 245 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 SPCS3P61009 180 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 RPP30P78346 268 aaKnown RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 BLOC1S1P78537 153 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 EWSR1Q01844 656 aaKnown RBP eCLIP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 NHLH2Q02577 135 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 TNFRSF9Q07011 255 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF266Q14584 549 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 ATP6V1FQ16864 119 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 RPL7L1Q6DKI1 246 aaKnown RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 FAM53AQ6NSI3 398 aaPredicted RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 DUX4L9Q6RFH8 374 aaPredicted RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 ZNF833PQ6ZTB9 187 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 HSD17B13Q7Z5P4 300 aaPredicted RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 STX12Q86Y82 276 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 OR5AN1Q8NGI8 311 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 OR4S2Q8NH73 311 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 OR9G1Q8NH87 305 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 RNASE11Q8TAA1 199 aaKnown RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 OSR1Q8TAX0 266 aaPredicted RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 GNPNAT1Q96EK6 184 aaPredicted RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 NEIL1Q96FI4 390 aaPredicted RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 GINS3Q9BRX5 216 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 PCGF1Q9BSM1 259 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 PARD6GQ9BYG4 376 aaPredicted RBP4.42□□□□□ -1.7
COL17A1-206ENST00000483876 CTSZQ9UBR2 303 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 FBXL17Q9UF56 701 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 PFDN2Q9UHV9 154 aa4.42□□□□□ -1.7
COL17A1-206ENST00000483876 USF3Q68DE3 2245 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 TENM1Q9UKZ4 2725 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 DSCAML1Q8TD84 2053 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 SAA2-SAA4A0A096LPE2 208 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 RAB19A4D1S5 217 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 ANKRD34BA5PLL1 514 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 MFSD2BA6NFX1 497 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 A8MXK9 166 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 UMAD1C9J7I0 102 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 TEX46H3BTG2 121 aa4.41□□□□□ -1.7
COL17A1-206ENST00000483876 TRIM77I1YAP6 450 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms