RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 C11orf45Q8TAV5 145 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 C2CD4CQ8TF44 421 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 GGHQ92820 318 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 SPIN2AQ99865 258 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 SPIN2BQ9BPZ2 258 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 MAP6D1Q9H9H5 199 aa8□□□□□ -1.13
SMARCC1-205ENST00000483847 TEX22C9J3V5 150 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 DEFB4AO15263 64 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 ATP8B1O43520 1251 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 IFNA4P05014 189 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 UBBP0CG47 229 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 C8orf88P0DMB2 117 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 QRFPP83859 136 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 CBX3Q13185 183 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 INSL4Q14641 139 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 GVQW1Q8N7I0 195 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 PYDC1Q8WXC3 89 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 FANCD2OSQ96PS1 177 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 RIMS4Q9H426 269 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 DIMT1Q9UNQ2 313 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 ZNF257Q9Y2Q1 563 aa7.99□□□□□ -1.13
SMARCC1-205ENST00000483847 IGHV3-35A0A0C4DH35 117 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 LOC100130705A0A1B0GUX0 176 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 A0A1B0GW64 132 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 LINC00473A8K010 186 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 FOXI3A8MTJ6 420 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 TMEM14DPA8MWL7 114 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 TRDCB7Z8K6 153 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 IGLL5B9A064 214 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 E7EUB6 86 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 RTL8CO15255 209 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 SAA1P0DJI8 122 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 SRMP19623 302 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 TCTAP57738 103 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 IGSF11Q5DX21 431 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 C1orf100Q5SVJ3 147 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 OR4A47Q6IF82 309 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 SLC38A6Q8IZM9 456 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 OR5B3Q8NH48 314 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 SPAG8Q99932 426 aaPredicted RBP7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 RARRES2Q99969 163 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 MFFQ9GZY8 342 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 LPAR5Q9H1C0 372 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 C12orf4Q9NQ89 552 aa7.98□□□□□ -1.13
SMARCC1-205ENST00000483847 MFSD2BA6NFX1 497 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 PRSS29PA6NIE9 313 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 BET1O15155 118 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 ACTL6BO94805 426 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 IL6RP08887 468 aaPredicted RBP7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 RRASP10301 218 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 AREGP15514 252 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 MYL12AP19105 171 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 DUTP33316 252 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 MAP2K4P45985 399 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 TMEM50BP56557 158 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 CDK10Q15131 360 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 ZNF124Q15973 351 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 GLT8D1Q68CQ7 371 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 LRRTM1Q86UE6 522 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 SLC25A42Q86VD7 318 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 APRG1Q8IVJ8 170 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 MMD2Q8IY49 270 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 MARC2Q969Z3 335 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 GALNT14Q96FL9 552 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 C11orf68Q9H3H3 251 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 C5orf66Q9H5L9 145 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 MRPL27Q9P0M9 148 aaKnown RBP7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 MGAT4AQ9UM21 535 aa7.97□□□□□ -1.13
SMARCC1-205ENST00000483847 HERC1Q15751 4861 aa7.96□□□□□ -1.13
SMARCC1-205ENST00000483847 NPIPB5A8MRT5 1133 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 TSPAN4O14817 238 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 CLEC3BP05452 202 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 CELP19835 753 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 MFAP2P55001 183 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 MED21Q13503 144 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 VKORC1L1Q8N0U8 176 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 FAM89BQ8N5H3 189 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 OR4A4PQ8NGN8 299 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 OR11H2Q8NH07 326 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 OSR1Q8TAX0 266 aaPredicted RBP7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 EEF1AKMT3Q96AZ1 226 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 ARHGAP5-AS1Q96IT6 56 aa7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 FYTTD1Q96QD9 318 aaKnown RBP7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 CMSS1Q9BQ75 279 aaKnown RBP7.96□□□□□ -1.14
SMARCC1-205ENST00000483847 TRBV6-7A0A0A0MS04 114 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 DPPA5A6NC42 116 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 FABP7O15540 132 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 REG1AP05451 166 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 GSTT2P0CG29 244 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 GSTT2BP0CG30 244 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 MYOD1P15172 320 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 GPR183P32249 361 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 SERPINB10P48595 397 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 TPBGQ13641 420 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 P2RY14Q15391 338 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 MED22Q15528 200 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 PLAC9Q5JTB6 97 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 ZNF575Q86XF7 245 aa7.95□□□□□ -1.14
SMARCC1-205ENST00000483847 SETD9Q8NE22 299 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms