RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 PRSS8Q16651 343 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 ACTBL2Q562R1 376 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 VAX1Q5SQQ9 334 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 PYHIN1Q6K0P9 492 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 TMEM17Q86X19 198 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 OR6F1Q8NGZ6 308 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 C4orf3Q8WVX3 66 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 TMEM68Q96MH6 324 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 FAM103A1Q9BTL3 118 aaKnown RBP14.03□□□□□ -0.16
HDAC6-225ENST00000483506 NXF2Q9GZY0 626 aaKnown RBP14.03□□□□□ -0.16
HDAC6-225ENST00000483506 FXYD6Q9H0Q3 95 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 RBM38Q9H0Z9 239 aaKnown RBP14.03□□□□□ -0.16
HDAC6-225ENST00000483506 RABL2AQ9UBK7 228 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-225ENST00000483506 MTFP1Q9UDX5 166 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 RABL2BQ9UNT1 228 aa14.03□□□□□ -0.16
HDAC6-225ENST00000483506 A0A1W2PN81 502 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 TNFSF12O43508 249 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 CREBL2O60519 120 aaPredicted RBP14.02□□□□□ -0.17
HDAC6-225ENST00000483506 CHRNA7P36544 502 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 RAB9AP51151 201 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 MRPS10P82664 201 aaKnown RBP14.02□□□□□ -0.17
HDAC6-225ENST00000483506 RUNX1Q01196 453 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 CATR1Q13166 79 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 OR2B11Q5JQS5 317 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 TMEM65Q6PI78 240 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 UNQ5815/PRO19632Q6UWF5 114 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 MRPL41Q8IXM3 137 aaKnown RBP14.02□□□□□ -0.17
HDAC6-225ENST00000483506 ZNF491Q8N8L2 437 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 LFNGQ8NES3 379 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 OR52I2Q8NH67 350 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 ABHD5Q8WTS1 349 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 GPHA2Q96T91 129 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 A3GALT2U3KPV4 340 aa14.02□□□□□ -0.17
HDAC6-225ENST00000483506 G3V4G9 280 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 GABARAPH6UMI1 98 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 CNIH1O95406 144 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 BRI3O95415 125 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 CD33P20138 364 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 TBPP20226 339 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 SSBP1Q04837 148 aaKnown RBP14.01□□□□□ -0.17
HDAC6-225ENST00000483506 BEAN1Q3B7T3 259 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 PUSL1Q8N0Z8 303 aaKnown RBP14.01□□□□□ -0.17
HDAC6-225ENST00000483506 GRPEL2Q8TAA5 225 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 VSTM2AQ8TAG5 236 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 RAX2Q96IS3 184 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 DCUN1D5Q9BTE7 237 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 KLK11Q9UBX7 282 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 VSIG4Q9Y279 399 aa14.01□□□□□ -0.17
HDAC6-225ENST00000483506 H3BUA1 57 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 I3L521 148 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 ZNF701M0R085 212 aaPredicted RBP14□□□□□ -0.17
HDAC6-225ENST00000483506 CTDSPLO15194 276 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 RAMP3O60896 148 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 HRASP01112 189 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 GNB1P62873 340 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 FHL3Q13643 280 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 ASPHD1Q5U4P2 390 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 IDO2Q6ZQW0 420 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 MMD2Q8IY49 270 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 SPAG16Q8N0X2 631 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 CD300LFQ8TDQ1 290 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 FCAMRQ8WWV6 532 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 RCC1LQ96I51 464 aaKnown RBP14□□□□□ -0.17
HDAC6-225ENST00000483506 SLA2Q9H6Q3 261 aa14□□□□□ -0.17
HDAC6-225ENST00000483506 ZNF430Q9H8G1 570 aaPredicted RBP14□□□□□ -0.17
HDAC6-225ENST00000483506 CCL24O00175 119 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 GPR31O00270 319 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 KBTBD11O94819 623 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 OR2A4O95047 310 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 CD74P04233 296 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 UCP3P55916 312 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 TAS2R31P59538 309 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 TSPAN5P62079 268 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 DEFA6Q01524 100 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 POU2AF1Q16633 256 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 CMTM1Q8IZ96 169 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 TMEM167AQ8TBQ9 72 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 SMIM4Q8WVI0 70 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 SRSF12Q8WXF0 261 aaKnown RBP13.99□□□□□ -0.17
HDAC6-225ENST00000483506 RHOVQ96L33 236 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 OR2A7Q96R45 310 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 AIFM2Q9BRQ8 373 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 GNB4Q9HAV0 340 aa13.99□□□□□ -0.17
HDAC6-225ENST00000483506 PGLYRP1O75594 196 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-225ENST00000483506 DUS4LO95620 317 aaKnown RBP13.98□□□□□ -0.17
HDAC6-225ENST00000483506 HPRT1P00492 218 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 DGCR2P98153 550 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 TNXAQ16473 311 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 DEFB136Q30KP8 78 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 OXLD1Q5BKU9 147 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 RNASE12Q5GAN4 147 aaKnown RBP13.98□□□□□ -0.17
HDAC6-225ENST00000483506 AADACL3Q5VUY0 350 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 LPCAT3Q6P1A2 487 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 LHFPL1Q86WI0 220 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 C1QL4Q86Z23 238 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 VKORC1L1Q8N0U8 176 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 ARRDC1Q8N5I2 433 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 TMEM229BQ8NBD8 167 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 OR51H1Q8NH63 302 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 DIRAS2Q96HU8 199 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms